Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2478 ATGAAAGAGTTAAAATTCTGGGCCTCCTCTTCCCTTACCTATGAATGGGGATATGATGTTTTCCTCAGTTTTCGAGGAGAGGATACTCGAAAGGGTTTTACCGGAAACCTTTACAATGCTCTTTGTGGAAAAGGAATCAACACTTTCATAGATGATCAAGAACTTAGGAAAGGAGAAGCAATTACACCAACTCTTAAGATGGCAATCCAACAATCAAGGATTGCAATTGTGATTTTCTCAGAAAACTATGCATCATCCACATTTTGTTTGGAAGAACTTACAAAGATCATGGAGTGCATAAAACACAGGGGCAGGTTGGTTTGGCCAGTTTTTTATCAAGTTGACCCTTCTGATGTGCGCCATCAGAAAGGGAGCTACGCAAAAGCACTGGCTAATCATGAAAGTAATAAAAAAATTGACAAAGAAAAGGTCAAACAGTGGAGGTTAGTTTTGCAAGAAGTAGCTGGTATATCAGGTTGGCATTTCGAACACGGGTACGAGTATGAGTTCATTGGGAAGATCATTCAAGAGGTCTCGGAAAAGATTAATCGTAGACCTTTACATGTGGCTAAATACCCTGTTGGGTTAGAGTCTCGAGTGCAAAAAGTGAACTCACTTTTAGAAGTTGAATCAAATGAGGGGGTTCGCATGATTGGGATATATGGAATGGGGGGGTTAGGTAAAACAACACTTGCATGTGCTGTATACAATTGCATTGCTGATCAATTTGATAGTCTATGTTTTCTTGGTGATATTAGAGAAAATTCAATGAAGCGTGGGTTGGTACAATTACAGGAGATGCTTCTTCTAGAATTAGCTGGGGAGAAATATCTTAAGTTCTGCAGTTTAAATAAAGCAATTCCTATTATCAAAAGTAGGCTTCGTGGGAAAAAAAATCTATTGATTTTGGATGATGTTGACAGTTTGGAGCAACTAAAAGCACTTGCCGGTGGACTTGATTGGTTTGGTTCTGGCAGCAGAGTTATTATCACAACAAGGGATAAGCATCTGCTGCAGGTTTATGGCGTTGAAAGAGTCTACGAAGTAGAAGAATTGAATTGTGAAGAAGCCCTAGAATTGTTTGGTTGGAATGCTTTCAAAACAGAAGAAATTGATCCTAGTTATGAAGACATTTCAAAGAGAGTAGTGCTTTATTCTAATGGCCTTCCATTGGCTGTTGAATTAATAGGTTCTGACTTGTATGGTAAAACAAAATTGGAGTGGAAATCTGCTTTAGATACTTATGAAAAAATTCCTCATGAAAATATTCAGGAAATTCTAAGAGTAAGTTATTATGGCCTAAAGGAATTTGAGAAGGAAATCTTTTTAGACATCGCATGCTTCTTCAAAGGATACAGACTAAGTGATGTCATGAACATACTATGTAGTGGTCGTGGCTTCGACCCAGACTATGCTATTCAGGTATTGGTTGATAAGAGTCTGATAAAAATCGACAATTGCCGTGTGAGGCTGCATGACATGATTCAAGATATGGGTAGAGAAATTGTAAGGCTAGCATCACCCTCAAAGCCAGGTGAACGAAGTAGATTATGGTTCTACAAAGATATTCTTCACGTCTTCAAAGAGAACAAGGGATCTGATAAAATTGAGATCGTTATGCTACAACTACTCAAAGATAAAGAAGTACGGTGGGATGGAAATGCATTGAAGAAGATGGAAAACCTCAAAATATTGGTAATAGAAAAAGCTCGCTTTTCCAGAGGACCTAATCATCTTCCAAAAAGTTTAAGAGTGCTAAAATGGAGTGATTATCCTGAATCATCACTGCCGGTTCACTTTGATCCTAAGAAACTTGTCATACTTGACTTGTCTATGAGCTGTATTACTTTTGATAATCAATTGATCATGAAATTCAAGTCTTTGAAGGAATTGAAGTTAAGTGGATGCCAATCCTTAAAGCAAGTACCTGACATGTCTGGAGCTCAAAATTTGGAGAAACTGCATCTTGATTCCTGCATGAATTTAGTTGGAGTTCATGATTCCGTTGGATTCCTTGAAAAACTTGAAGACTTGAATCTTAATCGTTGCACCAGTCTAAGGGTTCTTCCTCATGGCATCAACTTACCTTCTCTTAAAACCATGTCCTTTAGGAATTGTGCAAGTCTCAAGAGTTTTCCAGAAATTTTAGGTAAGATGGAAAACACAACATACCTTGGTTTAAGTGATAGTGGCATAAGTGAATTGCCCTTCTCCATTGAACTTCTTGAAGGGCTTGCAAACCTTACTATAGATAGATGCCAGGAGCTACTTGAACTACCGAGTAGTATTTTTATGTTGCCAAAACTAAGGACCTTAGATGCTTATAGTTGTAAGGATCTTGTACGAATTAAGAAGGGCAAAGGTCAAGTGAGGGAAACAATGTCTTCAGACATGAAAAGTGTTGTTGACTTCAGCTTTTGCCATCTGTCAGATGAATTTCTCGCCACACTTCTTCCATGCTTGCACTATGTCACAAATTTATCTCTTGATTACAGCATTATCACAATCCTTCCCTCATGCATCAATGCATGTCAATCTTTGAAGAGACTAACTTTGAATAACTGTACGGAGCTTCGAGAAATCAGAGGCCTGCCACCAAACATAAAACATCTTAGTGCACTAAACTGTACAACATTGACTTCCCAATCCAAGGATATGTTACTGAATCAGATGCTGCACAATTCTGGGGCAAAATATATCAGTTTTCTGGGATCAACTATCCCAAGTTGGTTCCATCAATATAAAATGGAACCGTGTCTGTCCTTTAGGTTCCAAAACAAATTGCCACCGATGGCTCTTTGTACTGTGGTAGTTTCGGGAGGTTGTTTTCTTTCAAAACGTTGTCTTCAGTATGAGTTTGACTTGATCATTAACGGCAGTCAGCGGCTCACAAACTTTTTCCATGTTAGGTGGTCTAAAACTAATGCAGTTGATACAAATTTAGATCATATAATTCTGCTGGATCTGCGGCTCAAAGCTAGCCTTGATATGATTGGAAAACTATGTATTAAGAATGGATGGAACCATGCTGAGATTTCATTAGTAAAAAATGGTGGAGAAGATATGAAATGGATGAGACTTCATGTACGGGAACAAAAAACAAACATGGAAGATATTCAAATCATAAATCCTGATGTTGCAACCGAAGGTTAA 3153 0.3812 MKELKFWASSSLTYEWGYDVFLSFRGEDTRKGFTGNLYNALCGKGINTFIDDQELRKGEAITPTLKMAIQQSRIAIVIFSENYASSTFCLEELTKIMECIKHRGRLVWPVFYQVDPSDVRHQKGSYAKALANHESNKKIDKEKVKQWRLVLQEVAGISGWHFEHGYEYEFIGKIIQEVSEKINRRPLHVAKYPVGLESRVQKVNSLLEVESNEGVRMIGIYGMGGLGKTTLACAVYNCIADQFDSLCFLGDIRENSMKRGLVQLQEMLLLELAGEKYLKFCSLNKAIPIIKSRLRGKKNLLILDDVDSLEQLKALAGGLDWFGSGSRVIITTRDKHLLQVYGVERVYEVEELNCEEALELFGWNAFKTEEIDPSYEDISKRVVLYSNGLPLAVELIGSDLYGKTKLEWKSALDTYEKIPHENIQEILRVSYYGLKEFEKEIFLDIACFFKGYRLSDVMNILCSGRGFDPDYAIQVLVDKSLIKIDNCRVRLHDMIQDMGREIVRLASPSKPGERSRLWFYKDILHVFKENKGSDKIEIVMLQLLKDKEVRWDGNALKKMENLKILVIEKARFSRGPNHLPKSLRVLKWSDYPESSLPVHFDPKKLVILDLSMSCITFDNQLIMKFKSLKELKLSGCQSLKQVPDMSGAQNLEKLHLDSCMNLVGVHDSVGFLEKLEDLNLNRCTSLRVLPHGINLPSLKTMSFRNCASLKSFPEILGKMENTTYLGLSDSGISELPFSIELLEGLANLTIDRCQELLELPSSIFMLPKLRTLDAYSCKDLVRIKKGKGQVRETMSSDMKSVVDFSFCHLSDEFLATLLPCLHYVTNLSLDYSIITILPSCINACQSLKRLTLNNCTELREIRGLPPNIKHLSALNCTTLTSQSKDMLLNQMLHNSGAKYISFLGSTIPSWFHQYKMEPCLSFRFQNKLPPMALCTVVVSGGCFLSKRCLQYEFDLIINGSQRLTNFFHVRWSKTNAVDTNLDHIILLDLRLKASLDMIGKLCIKNGWNHAEISLVKNGGEDMKWMRLHVREQKTNMEDIQIINPDVATEG* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2478 1050 Gene3D - 14 179 IPR035897 -
Mal6g2478 1050 Pfam NB-ARC domain 198 424 IPR002182 GO:0043531
Mal6g2478 1050 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Mal6g2478 1050 SUPERFAMILY "Winged helix" DNA-binding domain 422 527 IPR036390 -
Mal6g2478 1050 Gene3D Ribonuclease Inhibitor 535 796 IPR032675 -
Mal6g2478 1050 PANTHER ARCHAEAL ATPASE 28 1014 - -
Mal6g2478 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Mal6g2478 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
Mal6g2478 1050 Gene3D Ribonuclease Inhibitor 797 909 IPR032675 -
Mal6g2478 1050 Gene3D - 180 345 IPR027417 -
Mal6g2478 1050 SMART till_3 17 157 IPR000157 GO:0007165
Mal6g2478 1050 Gene3D - 351 435 IPR042197 -
Mal6g2478 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1014 IPR044974 GO:0006952
Mal6g2478 1050 CDD AAA 220 334 - -
Mal6g2478 1050 SUPERFAMILY L domain-like 538 889 - -
Mal6g2478 1050 Pfam TIR domain 18 183 IPR000157 GO:0007165
Mal6g2478 1050 PRINTS Disease resistance protein signature 293 307 - -
Mal6g2478 1050 PRINTS Disease resistance protein signature 623 639 - -
Mal6g2478 1050 PRINTS Disease resistance protein signature 386 400 - -
Mal6g2478 1050 PRINTS Disease resistance protein signature 217 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2478 Mal-Chr6 59136919 59141047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2478 18 783 WRKY Transcription Factor Family AT4G12020 30.952 1.31e-89 314