Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2475 ATGGAAGAAAGAAATGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGACCTCTATCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAGTTTGCAAGCACAGGAGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACTGATAAACCTATCTACTCCTCAGAAGGTTCAAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGCAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTCACCAAAGAAGTACTTAGAGAAAACCATTCCTGCTAATGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACGGCTCAAAGAGCTTTGTCTCACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAATATGCTAACCAAAAATCCAGAAATTACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAATACAACCTTGGCCAACCACTTCTACACTAAAAACAATGATAGCCAAAACTTTGATGTAGATGTTACCCCTTATAAATCCATTATTAGTCCATTACTACACAAAGCCTTTCATCACATGCCCATTTCAAATGGAGATATTAATACAAGCTTGATATTCTCATCATCATCTCCACTTGAAACATCCAACACTAATAATAATTTTATATCCAAATCTACAATGGATGTTTCATCAATGTTGTTGAATATGTCATCATCCTCAATGCTTGGTGATTTTAACAAGTCATGTGATGAGGTTACTACTACAAATTTCATGAATGATGGGTTGCAAGAGCAATTTAGTGACTACTCATTACCATTTGGTAACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTGAATGTGCCTCGTATTGATGAACAAGAATTGATGAATTTCAATATTGGTGATGGATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTTTTGATGTTCCCTCTAGTTACTCCACAACCAAGTGTTACACTTAA 1194 0.3626 MEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLSETRTSNMLTKNPEITQFCSNNMSLTKNTTLANHFYTKNNDSQNFDVDVTPYKSIISPLLHKAFHHMPISNGDINTSLIFSSSSPLETSNTNNNFISKSTMDVSSMLLNMSSSSMLGDFNKSCDEVTTTNFMNDGLQEQFSDYSLPFGNQYDNNALVKVPYNVNVPRIDEQELMNFNIGDGWKSNLLWDTSFCPFDVPSSYSTTKCYT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2475 397 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Mal6g2475 397 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 395 - -
Mal6g2475 397 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Mal6g2475 397 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Mal6g2475 397 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Mal6g2475 397 PANTHER PROTEIN FEZ ISOFORM X1 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2475 Mal-Chr6 59055866 59058310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2475 2 313 NAC Transcription Factor Family AT1G26870 55.352 6.81e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g2475 NAM 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2475 - - gmx:100783995 536.569