Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2440 ATGGAATTGGAAGCTGATCATCATCATCACAACAATGGAATCCGAAGCAGACCCAATTTCCCTCTACAGCTTTTAGAGAAAAAAGACAACAACATCCTAGATGTCTCCGAAGAACAACCATGTTCAACCACCGCAAACAACGGCTGTACCGACATCATCTCATCGGACAACCAGAAAAAGCCACCGCCGAAGCGCGCTTCGACGAAAGACCGGCACACCAAGGTAGACGGACGAGGCCGCCGGATCCGTATGCCGGCAGCCTGTGCCGCCAGAGTGTTCCAGCTCACGCGTGAGCTGGGACATAAATCCGATGGCGAGACGATTGAGTGGCTGCTTCAGCAAGCTGAGCCAGCCGTCATCGCTGCCACCGGAACAGGAACAATTCCGGCAAACTTCACTTCTCTTAACATCTCTCTTAGAAGCTCAGGCTCAACCATGTCGGCGCCGTCACACTATTTTCGAGGTAACTACTTTAACCCTAGCTCGTTCTCCTCCGCCGCAGCTCAGCTTAGAAACCGCGCCGAATGGGATAGAACTATGAACATGAACATGAACGTTGTAGGTGAAGATTCTAGAAGGAGTAGTAATTCTACCATGTTGGAGAATCCTTCTTCTTTATCAGCAATGTTGAATTTCAACAACGTACAAAATGCTATTCTACAAGCAAAACAAGAGCTCCGGGAAGACAACACCGCCACCGCAGGCGGTGGCGTTGGAGGATTTGAATTGTTGGGTTCTGATTCAGATGGAAGCATGGGGAGGAAAAGAAGATCAGAGCAAGAATTGTTATCACAAAATATGGGAAGTTATTTGTTACAATCAAATGTAGGGTCACTTCCTTCAAGTCATGCTTCAAATACGGCAGCGTTTTGGATGGTAACTGGTAATGGGAACCAAGGTGTTAATGTTGGTGGTGGTGGTGGTAATGGAAATGATCCAATTTGGGCGATTCCTTCTGTTGGGAATAATGGTTTGTATAGAGGAGCTATGTCTTCTCCTAATGGATTTCATTTCATGAATTTTGCTGCTTCTCCAATGAATCTTATGCCTGGAAGTCAACTAGGTTCCGGAATTGTCGGCGGCGGCGGTGGTGGAGGTGGAGGTGGTATTTTAGCCGAAAGCAATTTGAGTATGCTTTCGGCTATGAATGCCTATAGACAGATTTCGACGAATGGTATGTCAGATTCGTCGGGGCAACATCACGGCGTATGTGGAGGAGGAGATGATGGACATGATACAAGCAGTCAACATTCCTAA 1257 0.4726 MELEADHHHHNNGIRSRPNFPLQLLEKKDNNILDVSEEQPCSTTANNGCTDIISSDNQKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSSFSSAAAQLRNRAEWDRTMNMNMNVVGEDSRRSSNSTMLENPSSLSAMLNFNNVQNAILQAKQELREDNTATAGGGVGGFELLGSDSDGSMGRKRRSEQELLSQNMGSYLLQSNVGSLPSSHASNTAAFWMVTGNGNQGVNVGGGGGNGNDPIWAIPSVGNNGLYRGAMSSPNGFHFMNFAASPMNLMPGSQLGSGIVGGGGGGGGGGILAESNLSMLSAMNAYRQISTNGMSDSSGQHHGVCGGGDDGHDTSSQHS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2440 418 MobiDBLite consensus disorder prediction 37 61 - -
Mal6g2440 418 MobiDBLite consensus disorder prediction 37 77 - -
Mal6g2440 418 MobiDBLite consensus disorder prediction 62 77 - -
Mal6g2440 418 MobiDBLite consensus disorder prediction 231 257 - -
Mal6g2440 418 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Mal6g2440 418 Pfam TCP family transcription factor 67 215 IPR017887 -
Mal6g2440 418 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 11 418 - -
Mal6g2440 418 MobiDBLite consensus disorder prediction 390 418 - -
Mal6g2440 418 MobiDBLite consensus disorder prediction 1 21 - -
Mal6g2440 418 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 418 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2440 Mal-Chr6 57761373 57762629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2440 59 353 TCP Transcription Factor Family AT3G47620 45.509 1.32e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal6g2440 TCP 8.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2440 - - gmx:100781296 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2440 6 57761373 57762629 Mal6g2440 6 57761373 57762629 ECH
Mal6g2440 6 57761373 57762629 Mal5g4240 5 113326344 113327648 PCT