Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2416 ATGTTTTCATTGTTTTCAATGCTTAACTCATCTCCTTCTCCTTCTTCATTCTTTTGTATCATTATTCTTCTCCAAACAACTCTTCTTTTTGGTTTCTCTTTCTCTTCTAATCATGAAGCCTCAACTCTCTTCACATGGCTTCATAGTTCATCTACACAACCTCCTCCATCTTTCTCTAACTGGAACATCAATGATCCTAATCCATGCAACTGGACATCCATAACATGTTCATCACTCTCCTTTGTAACTGAAATCAATATACAATCCCTCACTCTTCAACTTCCTATACCTTCAAATCTCTCTTCATTTCCATTTCTCAACAAGCTTGTCATTTCTGATTCTAATCTCACTGGAACCATTCCTTTTGACATTGGTGATTGTTCTTCACTCACTGTTATTGATCTTAGTTTCAACAATCTTGTTGGTTCCATTCCTTCTAGTATTGGAAAGTTAGAGAATCTTGTAAACTTGTCTTTGAATTCAAATCAACTTACTGGAAAAATTCCATTTGAGATTAGTGATTGCATTAGTCTCAAAAATCTTTACCTTTTTGATAATCAGTTAGGTGGAAGTATCCCGAATTCGCTAGGAAAATTGTCGAAACTTGAAGTTCTTAGAGCAGGTGGAAACAAAGATATAATTGGGAAGATTCCAGAAGAGATTGGAGAATGTAGTAATTTGACTGTTTTAGGGCTTGCTGATACAAGAATTTCAGGCTCTTTGCCTGTTTCTTTTGGGAAACTTAAAAAGCTTCTAACATTGTCAATTTACACAACTATGATATCTGGTGAAATTCCAAAAGAGTTAGGTAACTGTTCTGAACTTGTTGATTTGTTCCTATATGAAAATAGCTTATCAGGATCAATTCCTTTAGAGATTGGTAAGCTAAAGAAGCTGGAACAGTTGTTTTTGTGGCAGAATGGTCTTGTTGGTGCTATTCCAAATGAAATTGGTAATTGTTCAAGTTTGAGAAACATTGATCTCTCTTTGAATTCATTATCTGGAACTATACCTTTGTCTTTAGGAGGTCTTTTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTATCTGGTTCTATTCCTTCAACTCTTTCAAATGCTGAAAAGCTTCAACAGTTGCAAGTTGATACAAATCAACTTTCAGGTTTGATTCCACCAGAGATTGGAAAGTTGTCAAATCTTTTGGTGTTTTTTGCTTGGCAGAATCAGCTTGAAGGAAGCATTCCTTCAAGTTTAGGAAACTGCAGTAAACTTCAAGCACTTGATTTGTCTAGAAATTCACTCACTGGTAGCATTCCTTCAGGACTATTTCAGCTTCAAAACCTCACAAAACTGCTTTTGATTTCGAATGATATATCAGGTTCTATACCATCAGAAATAGGTAGTTGTAAATCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACCGGAAGCATTCCTAAGACAATAGGAAGTCTCAAGAATTTGAACTTTTTGGATCTCTCTGGGAACCGTCTTTCTGGGCCGGTTCCCGATGAAATTAGAAGCTGCATACAACTTCAAATGATAGACTTTAGCTCTAACAACTTAGAAGGCTCACTTCCTAATTCCTTGTCATCATTATCTTCACTTCAGGTATTGGATGCATCTTTTAACAAGTTTTCAGGTCCATTGCCGGCGAGTTTAGGTCGTCTTGTTTCATTAAGTAAGTTAATCTTAGGAAATAACTTGTTTTCTGGACCAATTCCTGTATCACTTAGCCTATGTTCAAATCTCCAACTTATTGATCTTAGTAGCAATCAGCTCACCGGAAGCGTACCAGCCGAATTAGGCCAAATTGAAGCTCTAGAAATCGCTCTCAATCTTAGTTGCAATTTACTAACTGGAACAATCCCTCCTCGGATATCTGCTCTTAGCAAGCTTTCCATACTAGACCTTTCACATAACCAGTTAGAAGGAGATTTGCAAACTCTTTCAGAGCTAGATAATCTTGTCTCCCTCAATGTTTCTTACAACAAATTTAGTGGATATCTTCCAGATAACAAGCTTTTCAGGCAGTTAACATCGAATGACCTCACCGGAAATCAAGGGCTTTGCACTTCAGGTCAGGAATCATGCTTTGTAATGGACTCTAGCAAAACCGATATGGCGTTGAATAAGAATGAGATAAGGAAGTCGCGGAGGATTAAGGTAGCTATTGGATTGCTGATTGCCTTAACAGTTGTAATGTTACTTATGGGGATAACTGCTGTGATCAAAGCAAAAAGAACCATTCGAGACGATGATTCGGAACTAGGAGACTCATGGCCATGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGTTTAATTGATAGGAATATAATTGGTAAGGGATGTTCCGGTGTTGTGTATCGTGGTGAAATGGATAATGGAGAAGTCATTGCAGTGAAGAAACTGTGGCCTATAACAACTGATGAAGAAGAGGCATTGAAGGATTATAAAAGTGGAGTTCGAGACTCATTCTCAGCTGAGGTCAAAGCACTTGGATTGATCCGTCATAAGAACATTGTAAGGTTCTTAGGTTGTTGTTGGAACAAGAAAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTAAGCAGTGTACTTCATGAGAGGACTGGAAGCTCTCTTGACTGGGAACTTAGGTTCCGAATTCTTTTAGGTTCTGCAGAAGGACTTGCATATCTACATCATGACTGTGTTCCTCCTATAGTCCACAGAGATATCAAAGCCAATAACATCTTGATTGGACTTGAATTTGAACCTTATATTGCTGATTTTGGCTTGGCTAAGCTTGTTGATGATGGTGATGTCGGTCGTTCCTCCAATACAGTTGCCGGTTCCTATGGTTATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAAAGCGACGTTTATAGCTACGGTGTAGTTTTGTTAGAAGTCTTGACGGGTAAGCAACCAATTGATCCAACCATACCAGATGGTTTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCCACTTTACTTTCAAGACCAGAATCAGAAATCGAAGAAATGATCCAAGCATTGGGAATAGCCTTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAGATAAAGCATGAAAGAGAAGAATATGCAAAAGTTGATGTGCTTTTAAAAGCGTCTCCTGCAAATGATGCAAAATTTCTTGCAACATCTTCATCAGCATCAGCCATGCAAAGTTTTAATAAAAGCAATAATACAAGCTTCTCTGTGTCTTCATTGCTTCATTCATCTTCAAGTTCCAAGATGAGTTTCAAATGA 3387 0.3741 MFSLFSMLNSSPSPSSFFCIIILLQTTLLFGFSFSSNHEASTLFTWLHSSSTQPPPSFSNWNINDPNPCNWTSITCSSLSFVTEINIQSLTLQLPIPSNLSSFPFLNKLVISDSNLTGTIPFDIGDCSSLTVIDLSFNNLVGSIPSSIGKLENLVNLSLNSNQLTGKIPFEISDCISLKNLYLFDNQLGGSIPNSLGKLSKLEVLRAGGNKDIIGKIPEEIGECSNLTVLGLADTRISGSLPVSFGKLKKLLTLSIYTTMISGEIPKELGNCSELVDLFLYENSLSGSIPLEIGKLKKLEQLFLWQNGLVGAIPNEIGNCSSLRNIDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSTLSNAEKLQQLQVDTNQLSGLIPPEIGKLSNLLVFFAWQNQLEGSIPSSLGNCSKLQALDLSRNSLTGSIPSGLFQLQNLTKLLLISNDISGSIPSEIGSCKSLIRLRLGNNRITGSIPKTIGSLKNLNFLDLSGNRLSGPVPDEIRSCIQLQMIDFSSNNLEGSLPNSLSSLSSLQVLDASFNKFSGPLPASLGRLVSLSKLILGNNLFSGPIPVSLSLCSNLQLIDLSSNQLTGSVPAELGQIEALEIALNLSCNLLTGTIPPRISALSKLSILDLSHNQLEGDLQTLSELDNLVSLNVSYNKFSGYLPDNKLFRQLTSNDLTGNQGLCTSGQESCFVMDSSKTDMALNKNEIRKSRRIKVAIGLLIALTVVMLLMGITAVIKAKRTIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLIDRNIIGKGCSGVVYRGEMDNGEVIAVKKLWPITTDEEEALKDYKSGVRDSFSAEVKALGLIRHKNIVRFLGCCWNKKTRLLIFDYMPNGSLSSVLHERTGSSLDWELRFRILLGSAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKVDVLLKASPANDAKFLATSSSASAMQSFNKSNNTSFSVSSLLHSSSSSKMSFK* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2416 1128 SUPERFAMILY RNI-like 302 648 - -
Mal6g2416 1128 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Mal6g2416 1128 Gene3D Phosphorylase Kinase; domain 1 771 871 - -
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 260 333 IPR032675 -
Mal6g2416 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 1121 - -
Mal6g2416 1128 ProSiteProfiles Protein kinase domain profile. 785 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 188 259 IPR032675 -
Mal6g2416 1128 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 14 1121 - -
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 334 433 IPR032675 -
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 434 528 IPR032675 -
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 529 613 IPR032675 -
Mal6g2416 1128 SMART LRR_sd22_2 296 328 - -
Mal6g2416 1128 SMART LRR_sd22_2 488 503 - -
Mal6g2416 1128 SMART LRR_sd22_2 151 174 - -
Mal6g2416 1128 SMART LRR_sd22_2 633 658 - -
Mal6g2416 1128 SMART LRR_typ_2 488 512 IPR003591 -
Mal6g2416 1128 SMART LRR_typ_2 151 175 IPR003591 -
Mal6g2416 1128 SMART LRR_typ_2 296 320 IPR003591 -
Mal6g2416 1128 SMART LRR_typ_2 633 656 IPR003591 -
Mal6g2416 1128 SMART LRR_typ_2 536 560 IPR003591 -
Mal6g2416 1128 SMART LRR_typ_2 416 440 IPR003591 -
Mal6g2416 1128 SUPERFAMILY L domain-like 615 734 - -
Mal6g2416 1128 SUPERFAMILY Protein kinase-like (PK-like) 763 1064 IPR011009 -
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 614 701 IPR032675 -
Mal6g2416 1128 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Mal6g2416 1128 PRINTS Leucine-rich repeat signature 419 432 - -
Mal6g2416 1128 PRINTS Leucine-rich repeat signature 633 646 - -
Mal6g2416 1128 Pfam Protein tyrosine and serine/threonine kinase 789 1062 IPR001245 GO:0004672|GO:0006468
Mal6g2416 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Mal6g2416 1128 ProSitePatterns Protein kinases ATP-binding region signature. 791 814 IPR017441 GO:0005524
Mal6g2416 1128 SMART serkin_6 785 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2416 1128 Gene3D Ribonuclease Inhibitor 35 187 IPR032675 -
Mal6g2416 1128 SUPERFAMILY L domain-like 50 404 - -
Mal6g2416 1128 Gene3D Transferase(Phosphotransferase) domain 1 872 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2416 Mal-Chr6 56690339 56693992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2416 34 1079 Receptor kinase-like Gene Family AT5G56040 48.916 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal6g2416 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2416 - - mtr:MTR_5g045910 2000.33