Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2411 ATGGCCAAAAAACTTTTGCAGTTGAATGTTGTTCCATATAGAACAAGAAGATCATTCTCCTCATCATCATTCACAACACCTAAAGAAACTCCATCTCTCTACTCATTCCTTCAACCTTGTTTGTTTTCCATCAACAACAAACCCAATTATTGTGATGATGATGAAAAACCTCAAAATCTCCCAACTTCAGCACCAAACTCACTCTCTCTCACACCACACCAACTCACCACCCTTCAAACAACTCTCCACAAATCCCTCATCACATCTCAAACCGATGAAGCTTGGAAATCCTTCAAAACCCTCACAACCCACCATTCCTTCCCACCCAAACCCCTCACTAATTCCCTCCTCACCCACTTATCCTCTCTCCACGACATTCACAATCTCAAAAGAGCTTTCGCATCCACTCTCTTCCTCATCCAAAAAAACCCCAACCTCCTCCATTTCGATACCATTCATACCATCCTTCTTTCCATGAAATCCGCCAACACTGCTGCCCCTGCTTTTTCACTTGTTAAGTCAATGTTCAAATATCGTTTTTTCATCCCTTTTCATTCGTGGGGTGGCGTGCTCGTTGAGATTGCTAGAAACAATAACAACCTTGCTGCTTTCTTACCTCTTTTTGAAGAGAACTGCAGGGTTGCTTTGGATGAGAAGCTTGATTTCATGATACCTTATGTTTCTGCTTGTAATGCTGCTCTTGAAGCTTGTTGTTTTGGCCTTGAATCAGTTACTGATGCTGACAGAATTGTTGGAATTATGTCGAAGCTTGGTGTTAAGCCTGATGAGTTTAGTTTTGGATTTCTTGCTTATTTATATGCACTTAAGGGGTTAGAAAATAAGATAGATGAGTTAAAAGTTTTGATGGTTGGGTTTGGTTACTCAAAAAACAATAAAAGCTTTTATTCTAATTTGATTAGTGGTTATGTTAAGTCTGGTCATTTAGTTTCTGTGGAGTCGACTATTCTCAGTAGTTTGAATGATAGAGATGAGGGGGAAGTTTGGAATTTTGATCGAGATACCTTTTGTGTAGTAGTTAAGGAATATCTTCTGAACGGAAATATTAAGGGTTTAGCTAATTTGATTATTGAAGCTCAGAAATTAGAGTCTCGAAATATCAAAGTTGATGAGTCTATAGGTTTTGGTATTGTTAATGCATGTGTTAGTATTGGACTGTCAGAAAAAGCACACAGTATTCTTGATGAGATGAATGCTTTGGGAGGCTCTGTCGGTCTTGGGGTCTATGTGCCGATCTTGAAGGCTTATTGCAAAGAGAATAGAACCACGGAGGCTACTCTATTGGTGATGGAGATTAGTAGTTCAGGTCTTCGGTTGGATGTGGAAACCTATGATGCTCTGATAGAAACGTCCATGTCCAGTCAAGACTTTCAGTCGGTCTTTTCCCTGTTTAGGGATATGAGAGAGGCGAGGGTTCTTGATTTGAAAGGGAGTTACTTGACTATAATGACAGGTTTGATGGAGAATCATCGACCTGAATTGATGGCAGCTTTCTTAGATGAGGTGGTTGAGGATCCTCGTATTGAAGTAGGTACTCACGATTGGAATTCTATAATTCATGCTTTTTGTAAAGCTGGGAGGCTAGAAGATGCAAGAAGGACTTTCAGAAGGATGGTATTCCTGCAATTTGAGCCAAACGATCAAACTTACTTGTCTTTGATTAACGGATATGTTTCAGCAGAGAAATATTTTGATGTGATGATGTTATGGAACGAGGGGATCAAATTTGACCAGAATCTGGTTGATGCATTCCTCTATGCTATGGTCAAGGGAGGTTTCTTTGATGCTGTTATGCAAGTCGTGGAGAAATCTAAAGAGATGAAAATATTTGTTGATAAGTGGAGATACAAGCAAGCATTCATGGAGACACATAAAAAGCTCAAAGTGGCCAGGTTAAGGAAAAAGAATTTCAGAAAAATGGAAGCGCTTATTGCTTTCAAGAATTGGGCTGGCTTAAATGCGTGA 1983 0.3964 MAKKLLQLNVVPYRTRRSFSSSSFTTPKETPSLYSFLQPCLFSINNKPNYCDDDEKPQNLPTSAPNSLSLTPHQLTTLQTTLHKSLITSQTDEAWKSFKTLTTHHSFPPKPLTNSLLTHLSSLHDIHNLKRAFASTLFLIQKNPNLLHFDTIHTILLSMKSANTAAPAFSLVKSMFKYRFFIPFHSWGGVLVEIARNNNNLAAFLPLFEENCRVALDEKLDFMIPYVSACNAALEACCFGLESVTDADRIVGIMSKLGVKPDEFSFGFLAYLYALKGLENKIDELKVLMVGFGYSKNNKSFYSNLISGYVKSGHLVSVESTILSSLNDRDEGEVWNFDRDTFCVVVKEYLLNGNIKGLANLIIEAQKLESRNIKVDESIGFGIVNACVSIGLSEKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTTEATLLVMEISSSGLRLDVETYDALIETSMSSQDFQSVFSLFRDMREARVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMVFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNEGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNFRKMEALIAFKNWAGLNA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2411 660 Gene3D Tetratricopeptide repeat domain 480 626 IPR011990 GO:0005515
Mal6g2411 660 Gene3D Tetratricopeptide repeat domain 190 326 IPR011990 GO:0005515
Mal6g2411 660 TIGRFAM PPR: pentatricopeptide repeat domain 521 552 IPR002885 -
Mal6g2411 660 PANTHER BNAC05G43320D PROTEIN 11 660 - -
Mal6g2411 660 Pfam Pentacotripeptide-repeat region of PRORP 366 481 IPR033443 -
Mal6g2411 660 PANTHER OS01G0788900 PROTEIN 11 660 - -
Mal6g2411 660 Pfam PPR repeat 302 319 IPR002885 -
Mal6g2411 660 Gene3D Tetratricopeptide repeat domain 342 479 IPR011990 GO:0005515
Mal6g2411 660 Pfam PPR repeat family 521 564 IPR002885 -
Mal6g2411 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 517 551 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2411 Mal-Chr6 56526096 56528111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2411 383 578 Miscellaneous Gene Families AT4G11690 22.609 4.43e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2411 - - mtr:MTR_5g044930 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2411 6 56526096 56528111 Mal6g2411 6 56526096 56528111 ECH