Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2320 ATGATGTCAACACCATCACCAAGAGAGGATCTTACTGTTTCCTCCTCCAAAAAACCTATAGGGAGACCTCCCGGATCCAAGAACAAGCCCAAATCACCTTCTATTATCATAGAAAACAAAGAGACCCCTGTGAAACCATTTCTCTTTTCCATTCCAGTTGGAAATGATATTGTGGAGGATTTAATAAGCTTAGCTCAGTTTCATGAATCTAGCTTAACGGTGTTGGCGGGTTCTGGTCTTGTAACTGATGTTACACTTTTCAACCCATTGTCTCGTTCCTCTGATCCACCAATTGAAGGACCATTAAATATGATATCTCTAAATGGAACATATATTGAGATTGGAATGGATGATGAATTTTATTGTTGTTTTAATTTGAGTTTTGGATATGAAGTTTTGTGCTACTGTTTTTTTTTTTTTTTTTCTGGGTATGATTGA 438 0.3653 MMSTPSPREDLTVSSSKKPIGRPPGSKNKPKSPSIIIENKETPVKPFLFSIPVGNDIVEDLISLAQFHESSLTVLAGSGLVTDVTLFNPLSRSSDPPIEGPLNMISLNGTYIEIGMDDEFYCCFNLSFGYEVLCYCFFFFFSGYD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2320 145 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g2320 145 Pfam Plants and Prokaryotes Conserved (PCC) domain 45 113 IPR005175 -
Mal6g2320 145 SUPERFAMILY AF0104/ALDC/Ptd012-like 44 112 - -
Mal6g2320 145 Gene3D - 45 130 - -
Mal6g2320 145 ProSiteProfiles PPC domain profile profile. 41 145 IPR005175 -
Mal6g2320 145 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 115 IPR014476 GO:0003680
Mal6g2320 145 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 12 115 - -
Mal6g2320 145 CDD DUF296 45 111 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2320 Mal-Chr6 53901580 53904489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2320 9 112 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.962 1.27e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2320 - - cam:101498013 97.4413