Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2319 ATGATGTCAACACCATCACCAAGAGAGGATCTTACTGTTTCCTCCAAAAAACCTATAGGGAGACCTCCCGGATCCAAGAACAAGCCCAAATCACCTTCTATTATCATAGAAAACAAAGAGACCCCTGTGAAACCATTTCTCTTTTCCATTCCAGTTGGAAATGATATTGTGGAGGATTTAATAAGCTTAGCTCAGTTTCATGAATCTAGCTTAACGGTGTTGGCGGGTTCTGGTCTTGTAACTGATGTTACACTTTTCAACCCATTGTCTCGTTCCTCTGATCCACCAATTGAAGGACCATTAAATATGATATCTCTAAATGGAACATATGTAAATGCTGATTGTGGTCATGTTCCTCCACAGTTCATTACCCATCCAGCATTTTCATCTTTTTCCATTCAATTTTTTAGAGATGATGGAAAAGTAAGTGGTGGAATCGTTGGAGGTACACTTAAGGCTGCTGGTGTTGTTACAACGACGGTCACTCTTCTAAGGAATCCTGATTTTTACAGGCTGTCCATGATCAATGGAAATTATTATGAAATTGAAGAGGGCAAACCTGAGAGTGTTGCACCTGAATCAAGCAATAATGTTGTTAATGTGCAAAGGATTTGA 615 0.3935 MMSTPSPREDLTVSSKKPIGRPPGSKNKPKSPSIIIENKETPVKPFLFSIPVGNDIVEDLISLAQFHESSLTVLAGSGLVTDVTLFNPLSRSSDPPIEGPLNMISLNGTYVNADCGHVPPQFITHPAFSSFSIQFFRDDGKVSGGIVGGTLKAAGVVTTTVTLLRNPDFYRLSMINGNYYEIEEGKPESVAPESSNNVVNVQRI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2319 204 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g2319 204 ProSiteProfiles PPC domain profile profile. 40 185 IPR005175 -
Mal6g2319 204 Pfam Plants and Prokaryotes Conserved (PCC) domain 44 162 IPR005175 -
Mal6g2319 204 CDD DUF296 44 156 IPR005175 -
Mal6g2319 204 Gene3D - 44 183 - -
Mal6g2319 204 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 186 - -
Mal6g2319 204 SUPERFAMILY AF0104/ALDC/Ptd012-like 43 172 - -
Mal6g2319 204 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 186 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2319 Mal-Chr6 53847066 53847680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2319 16 192 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.111 1.33e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2319 - - cam:101509190 166.007