Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2318 ATGATGTCAACACCATCACCAAGAGAGGATCTTACTGTTTCCTCCTCCAAAAAACCTATAGGGAGACCTCCCGGATCCAAGAACAAGCCCAAATCACCTTCTATTATCATAGAAAACAAAGAGACCCCTGTGAAACCATTTCTCTTTTCCATTCCAGTTGGAAATGATATTGTGGAGGATTTAATAAGCTTAGCTCAGTTTCATGAATCTAGCTTAACGGTGTTGGCGGGTTCTGGTCTTGTAACTGATGTTACACTTTTCAACCCATTGTCTCGTTCCTCTGATCCACCAATTGAAGGACCATTAAATATGATATCTCTAAATGGAACATATCAAAACACTTTTAAGTGTTTCTGTTTTGTGGTTTTTCAGTATTAA 378 0.3836 MMSTPSPREDLTVSSSKKPIGRPPGSKNKPKSPSIIIENKETPVKPFLFSIPVGNDIVEDLISLAQFHESSLTVLAGSGLVTDVTLFNPLSRSSDPPIEGPLNMISLNGTYQNTFKCFCFVVFQY* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2318 125 Pfam Plants and Prokaryotes Conserved (PCC) domain 45 113 IPR005175 -
Mal6g2318 125 Gene3D - 45 122 - -
Mal6g2318 125 ProSiteProfiles PPC domain profile profile. 41 125 IPR005175 -
Mal6g2318 125 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 114 IPR014476 GO:0003680
Mal6g2318 125 MobiDBLite consensus disorder prediction 1 36 - -
Mal6g2318 125 CDD DUF296 45 113 IPR005175 -
Mal6g2318 125 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 12 114 - -
Mal6g2318 125 SUPERFAMILY AF0104/ALDC/Ptd012-like 44 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2318 Mal-Chr6 53763112 53764368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2318 9 111 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.286 8.78e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2318 - - cam:101498013 97.8265