Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2288 ATGGGTATCTGCATATCCGTTGCATCTTCTGAGATTCATGGAATTCCTCAAGTTCATGATGAGAATGTTATGATATTTGAAGCAAGCAAGGTCCAAAATGAGACTAAGAGACTTAGCTCTGTTTACTCTAAACAAGGTACTAAAGGTCTCAACCAAGATGCTGCCTCTCTTTACCAGGATTACGGCATGGAAGATGGAACATTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACATATAGTGAGCAAAATAGTAAACAATACTTTACCTTCCCTCATATTGAGCCAAAAGAATGCTCTTGAGGAGATTGATACAACAAAAAATGGTGTTGACAACAAACAAAACAAATTTTCAAACAATTTTCTAAAATGGAAAGAAGCAATTCTTGGTGCTTTCAATGTGATGGATGAGGAGGTGAAGCTACAAGAGAATCTAGATAGTTCTTGTAGTGGAACTACTGCTGTAGTTGTCATAAGACAGGGTGAAGGTCTTGTGATAGTTAACCTTGGTGACTCAAGAGCAATATTAGGAACAATCCATGATGAGAAACTCAAAGCCATTCAATTGACCACTGATTTAAAGCCTGGATTGCCTTGTGAAGCAAAGAGAATAAGGAGTTGCAATGGTTGTGTTTATGCACTTAAAGAAGAACCACATGTCCAAAGAGTATGGTTGCCCAATGAGAACTACCCTGGCCTAGCCATGTCTAGAGCTTTTGGAGATTTCATACTCAAAGACCATGGTGTTATTGCTACACCAGATATTTGGTATCACCGTTTAACATCATGTGACCAATTTATTGTTCTTGCAAGTGATGGGGTTTGGGATGTACTAAGTAATGAAGAGGTTGCATCAATTGTGTGGATGGTAGAAAGTGAAGGGGCAGCTGCAAGGGCAGTGGTGGAAGCAGCCACAGCTGCATGGGCAAAGAAGTTTCCTTCCTCTAGGGTAGATGATTGCACCGTGGTTTGCCATTTCTTGCAAAAGAAGAAACCACAAAACTTGAAGTATATGGAAACTGGAAAATTAGGTTAA 1038 0.3969 MGICISVASSEIHGIPQVHDENVMIFEASKVQNETKRLSSVYSKQGTKGLNQDAASLYQDYGMEDGTFCGVYDGHGRNGHIVSKIVNNTLPSLILSQKNALEEIDTTKNGVDNKQNKFSNNFLKWKEAILGAFNVMDEEVKLQENLDSSCSGTTAVVVIRQGEGLVIVNLGDSRAILGTIHDEKLKAIQLTTDLKPGLPCEAKRIRSCNGCVYALKEEPHVQRVWLPNENYPGLAMSRAFGDFILKDHGVIATPDIWYHRLTSCDQFIVLASDGVWDVLSNEEVASIVWMVESEGAAARAVVEAATAAWAKKFPSSRVDDCTVVCHFLQKKKPQNLKYMETGKLG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2288 345 SMART PP2C_4 31 326 IPR001932 -
Mal6g2288 345 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 332 - -
Mal6g2288 345 Pfam Protein phosphatase 2C 62 305 IPR001932 -
Mal6g2288 345 ProSiteProfiles PPM-type phosphatase domain profile. 38 328 IPR001932 -
Mal6g2288 345 CDD PP2Cc 37 289 IPR001932 -
Mal6g2288 345 Gene3D - 19 331 IPR036457 -
Mal6g2288 345 PANTHER ALPHABET, ISOFORM E-RELATED 1 332 - -
Mal6g2288 345 SUPERFAMILY PP2C-like 34 329 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2288 Mal-Chr6 52846927 52849309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2288 1 332 PP2C-type Phosphatase Gene Family AT5G26010 53.687 2.24e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2288 - - aip:107605550 454.136