Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2281 ATGGAGAATGATGTGTACAATGCTCCAATGAACATGGCTGGTCATTGCTATTCATTTGACCTTAACAACCAAAACAACAACATCATAAATGGAATTCCAATACTTTCTGGAGGAGAACAAGATCAACTTGTTGATGGTGGTTTCATAAATCATGTTACTATAGCTGATTCTACTTCATTTGGTACATCACAACAAGGAAGGACTATTATTGTGGAAAATCCCTCAAATCTCATTGTTAATAACAATGATTTTTCAGTTCCTGCTAGGATTGGTCTTCAAGAAAATTTAGAAGCAATAGTTCCATACATATTCAATAATTGGCATGATACTTCAAACTCAAACCCTTTGTGTGCAAATTTTGGTGATAGTAATAGCTATGTTAACAAGTTTTTGAAAGCTCAAGAGGGTAATGTTGGAACCGAATTCATGTCATATTCGCCGATAGGGAACATTGATCCAAATGGATGGCAATCATCAAATGTGGCTTATAGTTCTTCAAATTGTAGCAATGAACTTTCACTAAGTCTTGCAACATCTCCAACTTCAGGTCAATGCTCAGAGATTAGTTGCTCTGATTTAACTCATAGCATGAATGGAACAAGATCAGGTTTGGAACAAGCCTCATGTAGTAGTATGGAGCTTTCTATGAGTTTAGGGAATGATAAACATGTCAAATTTTCACCGGCAATATTAGGATCAAGATACCTTGCTGTAATTCAGGAAATACTTGTTCAGATTGCATCGTATTCATTTGAAAATCTTGATGAGATAAACTATTCGGGCTCCGGTGTTAGAGGACGAGGAAATAAATCAACTTCGTCAAGCTCAACCAAGCGAAGGATAGGAATAAATCGCGATGCGGATTCTTTGTCAGAAGTTTACGCCGATTCTTCATTGCAAAGGCATGCTGCTGAATCAAAGAAATCTCAACTTCTGATGCTTCTACAGATGGTGGACAGTCAATATAGTCAATGTTTGGATGAGATTCACACTGTTGTATCTGCATTTCATGCTGCTACTGAACTTGATCCACAAATACATGCACATTTCGCTGTCAAAACGGTTTCTCGACTATATAAGGACTTGAGAGAGAGGATTAGCAAACACATTCTTTCCATGGGATCAAATTTTAACAGTTCATGGTCTGAAGAGGATATGGAATTGTCTGTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTCCAACAGTTGAAAAAGAAAGATCAGTTATGGAGGCCCCAAAGGGGATTGCCAGAAAGATCTGTATCCGTTCTACGTGATTGGATGTTTCAGAATTTCCTTCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAATTAAAAGTGGGTTGACTAGAAGCCAGGTATCCAACTGGTTTATAAATGCGCGTGTTCGGCTATGGAAACCATTGATTGAGGAAATGTATGCTGAAATGAATAGAAGAAAAGCTTGTCGAAATGAAGGAGAAAATGAGAGCAGTGAAAGAAGTAGGATAAGCATTAACAATCAAATGTTTAATATCAATTGA 1533 0.3731 MENDVYNAPMNMAGHCYSFDLNNQNNNIINGIPILSGGEQDQLVDGGFINHVTIADSTSFGTSQQGRTIIVENPSNLIVNNNDFSVPARIGLQENLEAIVPYIFNNWHDTSNSNPLCANFGDSNSYVNKFLKAQEGNVGTEFMSYSPIGNIDPNGWQSSNVAYSSSNCSNELSLSLATSPTSGQCSEISCSDLTHSMNGTRSGLEQASCSSMELSMSLGNDKHVKFSPAILGSRYLAVIQEILVQIASYSFENLDEINYSGSGVRGRGNKSTSSSSTKRRIGINRDADSLSEVYADSSLQRHAAESKKSQLLMLLQMVDSQYSQCLDEIHTVVSAFHAATELDPQIHAHFAVKTVSRLYKDLRERISKHILSMGSNFNSSWSEEDMELSVETSFIQKQWALQQLKKKDQLWRPQRGLPERSVSVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRKACRNEGENESSERSRISINNQMFNIN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2281 510 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 93 507 - -
Mal6g2281 510 PANTHER HOMEOBOX PROTEIN ATH1 93 507 - -
Mal6g2281 510 MobiDBLite consensus disorder prediction 262 282 - -
Mal6g2281 510 Pfam Homeobox KN domain 428 467 IPR008422 GO:0003677|GO:0006355
Mal6g2281 510 ProSiteProfiles 'Homeobox' domain profile. 408 471 IPR001356 GO:0003677
Mal6g2281 510 SMART prehox3 224 368 IPR006563 -
Mal6g2281 510 SUPERFAMILY Homeodomain-like 413 480 IPR009057 -
Mal6g2281 510 MobiDBLite consensus disorder prediction 264 280 - -
Mal6g2281 510 Pfam Associated with HOX 230 367 IPR006563 -
Mal6g2281 510 CDD homeodomain 411 471 IPR001356 GO:0003677
Mal6g2281 510 Gene3D - 414 493 - -
Mal6g2281 510 SMART HOX_1 411 475 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2281 Mal-Chr6 52748442 52751149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2281 170 484 Homeobox Transcription Factor Family AT4G32980 59.375 2.42e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal6g2281 POX 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2281 - - gmx:100812648 589.341