Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2263 ATGCCTAAAATGAAGCAACTCCTTCGAAAGCTTCACATCGGTGGTGGCGCTGCTCCTGCTGCAACTACAATCAATAATCATAATCCAAACGCAAACGCTGCATTGCCGCCGCTTTCTAATTCCGATTCTCTAACTACAACTCCTTCTCCTTCGCCGTCTCCATCGCCGTCTCCGACGGTGGTTCAGAATCCGCGAAACGACGGCGTTGATAGAGGTGTGAACGACTTTAATTTGTTGCAGGAAGAAGAGTTTCAGGTTCAATTAGCGCTTGCGATTAGTGCTTCGGATTCCGATCCAAAGGATGTTGATGAATCTGCTCAGATCGATGCTGCTAAACAGATCAGCCTTGGCTATTCTGCTTCGCTTACGGATACTCCTGCACTTGTTCAGTTTCAATCGCTTCGTTATTGGAATTACAATGTCATTGCTTATAACGAGAAAGTGATGGATGGGTTTTATGATGTCTATGGGATCGATGCAAGTTTCATTGAACGGGGAAAGATGCCATTGTTGGTGGATCTGAAAACTGTGCCCACCTCACGAAATGTTGATTATGAAGTAATCTCGGTGAACCGCGTTGTTGATGTTGAGCTAAGTCAGCTTGAGGAAAAAGCCTGTGCCTTGTTTGAAGAGTGTTCTGTTTCTGAACTAGGACTGTTTTTGAGTGGCTTAATCCAGAAACTTGCTGATGTTGTTGTTAATAGAATGGGTGGACCAGTTGGTAGTGCTGATAATATCATGACAAAGTGGGCTATGAGGAGCCGTGAATTGCGAGATTCTTTAAGAACTGTTGTCCTTCCTCTTGGCTGTCTAGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATTAATATTCCCTGCATGCTTGTAAAAGGGAGCTATTACACAGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGTACACTTATTCCTGCTGAGGTGCCCAGCAGTCAGATCCAAAACTATGGTTTTGCTGGTAGGGATTTCGCAGAGATTGCAGGACAACCTAACAACTTATATCCAATGTTTGGTGATGAAACTGATGTGCTGGGGGTATTGTCTGATTGTACCGTAGGGAGGGTCCAGACAAAAGAATTAATAGAAATTGGCAGTCAAACAAAACCAGATAAAATAAATCATGTTAAGGTAAATGAAGCAGGGAGATTTAAGCAAACAGAAGCGTATGAATGCTCATCACATCCAGAGTCATCACATGCAGAAAACATGCATGTAAAAAATGTGTCACAGTATGTCCTCAGTGCCGCAAAGAACCCAGAGTTTGCCTCAAAACTGCACACTATTCTTTTAGAAAGCGGTGCATCACCTCCTTCTGATCTTTTTTCAGATATGAATTCCCAGCATCGGGGTTTAGATACTGTTCAAGCTGACCAAAATAGGCTGTTATTAAGTTATGATGATAAGTCTCTCATACTCCCTCAAGGAGTGGGCTCTGCTGGTAATACTAAAATATGTCAAGCGGCTGACCAGTTATCCGAACAGCAAAAAGAATTACGCACTGCCATTGAATTTTATGATTCTTCGCAAAGTTATTGTACAAGGAATGCTTTTGCAACTGTTTCCGGTAAAGATAGTAATATAGAGCAATCTAATCCATTAATTGTTGACTTTGCTTGTCTTAATACACACAAGACATGTAAAGAAAAGTGTCCCGAGTCTTCCTTGCCCAAGGAAGTCCTTTCTTGCAAAAGGCATAATGGCGTTGAATGTTTTTGTGATGATGATGAAATTGGTCCTAGAAATGAGGCTGGAGCTTCTTTGAATAACATTGAACATGGGAATGATTCAGTCATTCAAATAAACGAGACTGTCATTGGAGATTGTGTCCTATATGATGACGATAAAAGCAAGAAAGTTCACCCAATACTTGGTGAAGACACACAATGGGAAATTCAATGGGAGGATCTTGTTGTTGGTGAGCGTATTGGTATTGGTTCTTACGGTGAAGTTTACCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTAGACCAAGATGTCTCTGGCGATGCGCTAGATCAGTTCAAATCGGAAATTGAGATTATGCTAAGGCTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCTCCACATTTTTCTATCTTGACAGAGTTTCTTCCTAGAGGCAGTTTATATAGGATATTGCATCGTCCCAATCTTGTACTTGATGAGAAGAGGAGGTTGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCACACCAGCCATCCTCCCGTTGTCCATCGAGATTTGAAGACTCCAAACCTTCTTGTTGACAGAAATTGGGTTGTAAAGGTCTGTGATTTTGGTCTGTCACGTATGAAGCACCATACATATTTGTCATCGAAGTCATGTGCTGGAACGCCTGAGTGGATGGCGCCAGAAGTCTTACGCAACGAGCCTGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATCTTGTGGGAGTTGACTACCACGAAAATCCCATGGCATGGCATGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTTCAAAATAAACGTCTTGAGATTCCAGAAGAAATGGATCCAGGAGTAGCTCAAATAATACGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCATTCTCGCAGCTGATGTCTCGTCTTTACCGTCTTCGCCAATTGGTTGCCCGTAAAACGGGCTCTACACATTAA 2799 0.4273 MPKMKQLLRKLHIGGGAAPAATTINNHNPNANAALPPLSNSDSLTTTPSPSPSPSPSPTVVQNPRNDGVDRGVNDFNLLQEEEFQVQLALAISASDSDPKDVDESAQIDAAKQISLGYSASLTDTPALVQFQSLRYWNYNVIAYNEKVMDGFYDVYGIDASFIERGKMPLLVDLKTVPTSRNVDYEVISVNRVVDVELSQLEEKACALFEECSVSELGLFLSGLIQKLADVVVNRMGGPVGSADNIMTKWAMRSRELRDSLRTVVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQIQNYGFAGRDFAEIAGQPNNLYPMFGDETDVLGVLSDCTVGRVQTKELIEIGSQTKPDKINHVKVNEAGRFKQTEAYECSSHPESSHAENMHVKNVSQYVLSAAKNPEFASKLHTILLESGASPPSDLFSDMNSQHRGLDTVQADQNRLLLSYDDKSLILPQGVGSAGNTKICQAADQLSEQQKELRTAIEFYDSSQSYCTRNAFATVSGKDSNIEQSNPLIVDFACLNTHKTCKEKCPESSLPKEVLSCKRHNGVECFCDDDEIGPRNEAGASLNNIEHGNDSVIQINETVIGDCVLYDDDKSKKVHPILGEDTQWEIQWEDLVVGERIGIGSYGEVYRADCNGTEVAVKKFLDQDVSGDALDQFKSEIEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRILHRPNLVLDEKRRLRMALDVAKGMNYLHTSHPPVVHRDLKTPNLLVDRNWVVKVCDFGLSRMKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTTKIPWHGMNPMQVVGAVGFQNKRLEIPEEMDPGVAQIIRDCWQTEPHLRPSFSQLMSRLYRLRQLVARKTGSTH* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2263 932 SUPERFAMILY Protein kinase-like (PK-like) 654 918 IPR011009 -
Mal6g2263 932 CDD STKc_MAP3K-like 671 917 - -
Mal6g2263 932 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Mal6g2263 932 PRINTS Tyrosine kinase catalytic domain signature 888 910 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 PRINTS Tyrosine kinase catalytic domain signature 844 866 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 PRINTS Tyrosine kinase catalytic domain signature 825 835 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 PRINTS Tyrosine kinase catalytic domain signature 739 752 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 PRINTS Tyrosine kinase catalytic domain signature 778 796 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 Gene3D Transferase(Phosphotransferase) domain 1 744 929 - -
Mal6g2263 932 MobiDBLite consensus disorder prediction 19 72 - -
Mal6g2263 932 Pfam Ethylene-responsive protein kinase Le-CTR1 130 333 - -
Mal6g2263 932 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 69 927 - -
Mal6g2263 932 ProSiteProfiles Protein kinase domain profile. 665 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2263 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Mal6g2263 932 MobiDBLite consensus disorder prediction 21 48 - -
Mal6g2263 932 SMART serkin_6 665 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2263 932 PANTHER SERINE-THREONINE PROTEIN KINASE 69 927 - -
Mal6g2263 932 Pfam Protein tyrosine and serine/threonine kinase 666 917 IPR001245 GO:0004672|GO:0006468
Mal6g2263 932 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2263 Mal-Chr6 52435663 52444726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2263 642 923 MAP Kinase Kinase Kinase AT5G11850 83.333 5.69e-171 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mal6g2263 PK_Tyr_Ser-Thr 1.9e-66 CL0016