Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2246 ATGAACTCTCTCTCCCTCTACACTCTCCATTTCTACTCTCGCAACTCCTTCTTCCACTCCAAACCCACCACCCCATCCTTCCTCTCTCTCAAACCAAAACTCCCAACCATAATACAATGTTGCTCCAACAACAACAACAACATAATCGACATCGACATGGTAAAAACCAAACAAGGAACCTACGAACAAAAACAAAACAAAGTCTGTGTCCTTTGGGACCTCGACAACAAACCACCACGTGGACCACCGTACAACGCCGCCTTATCTCTCAAAACCCTCGCCGAACGCTTCGGTGACGTCACCGACATCTCCGCTTACGCCAACCGCCACGCTTTCATCCATCTCCCTCAATGGGTCGTCAACCAACGCCGTGAACGTAAAAACCTCGACATCCTCGAACGTAAAGGAATCATTAACCCCTCCGAACCTTATATCTGTTCTGTCTGCGGTAGAAAATGTAAAACCAACGTGGATCTCAAGAAACACTTTAAACAGCTTCATCAACGTGAGAGACAGAAGAAGGTGAACCGTTTGAATTCGTTGAAGGGGAAGAAGAGGCAGAAGTATAAGGAGAGATTTGTGAGTGGTGATGAGAAGTATAATAATGCGGTTAGAGAGATTTTGAAGCCGAAAGTTGGGTATGGGTTGGCTTCGGAGTTGCGGCGGGCGGGTGTATTTGTGAAGACTGTGGAGGATAAGCCACAGGCTGCTGATTGGGCTTTGAAGAAGCAGATGATGCATTCTATGAGTAGAGGGATTGATTGGTTGTTATTGGTTTCCGATGATTCGGATTTTAGTGAGATGTTGAGGAAGGCTAGAGAGGCCAATTTAGGGACTGTTGTTGTTGGGGATGTTGATAGGGCTTTAGGGAAGCATGCTGATTTGTGGGTGCCGTGGAATGCTGTTGAGAATGGTGAGGTTTTGGATATGGATTTGGTGCCAAGGAACAGAGAGAGGAGAAGGACAACGAAGAATGCAACTACAACGACGACAATGGATGATTTTGGTGATGTGTTGTTTTTTCATGAGGGTGATGAAATGGATGATGATTTTATGTTTGAGTATAGCGATGATGAGGATTTTGATGAGGATTCAGATGAAGAAGATGAAGATGGGTTTTTTATTTATTGA 1131 0.4492 MNSLSLYTLHFYSRNSFFHSKPTTPSFLSLKPKLPTIIQCCSNNNNNIIDIDMVKTKQGTYEQKQNKVCVLWDLDNKPPRGPPYNAALSLKTLAERFGDVTDISAYANRHAFIHLPQWVVNQRRERKNLDILERKGIINPSEPYICSVCGRKCKTNVDLKKHFKQLHQRERQKKVNRLNSLKGKKRQKYKERFVSGDEKYNNAVREILKPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQMMHSMSRGIDWLLLVSDDSDFSEMLRKAREANLGTVVVGDVDRALGKHADLWVPWNAVENGEVLDMDLVPRNRERRRTTKNATTTTTMDDFGDVLFFHEGDEMDDDFMFEYSDDEDFDEDSDEEDEDGFFIY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2246 376 MobiDBLite consensus disorder prediction 356 376 - -
Mal6g2246 376 ProSitePatterns Zinc finger C2H2 type domain signature. 146 167 IPR013087 -
Mal6g2246 376 Gene3D - 58 301 - -
Mal6g2246 376 ProSiteProfiles Zinc finger C2H2 type domain profile. 144 172 IPR013087 -
Mal6g2246 376 PANTHER - 42 366 - -
Mal6g2246 376 CDD PIN_LabA-like 154 284 - -
Mal6g2246 376 SMART c2h2final6 144 167 IPR013087 -
Mal6g2246 376 PANTHER OS06G0166200 PROTEIN 42 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2246 Mal-Chr6 52138921 52140051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2246 5 319 C2H2 Transcription Factor Family AT5G52010 65.831 7.92e-157 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal6g2246 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2246 - - pvy:116125650 457.218