Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2226 ATGGCATTTCAATTTGGAGTACTTTTTGTTCTTGTTTTGCTCAGTTGTTTCAATGTCAATTCAGTGGATTCTGATGATGGGTCAACATTGTTAGAGATAAAGAAGGCATTCAGGGATGTGGATAATGTTCTATATGATTGGACAGGCTCACCAACATCAGATTATTGTGCTTGGAGAGGGGTTACATGTGATAATGTCACCTTCAATGTTATTGCACTCAATCTTTCAGGTCTGAATCTTGATGGCGAAATTTCGCCTGCAATAGGGAGGCTTCAAAGCTTGGTGTCTATTGATTTAAAAGAAAACCGGTTATCAGGCCAGATACCAGATGAGATTGGTGACTGTTCTTTGTTGCAAAGCTTGGACTTGTCATTTAACGAAATACGAGGGGATATACCATATTCAATTTCTAAGCTGAAACAATTGGAAAATCTGATTTTGAAGAATAATCAGTTGATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAATTTTTGGACCTTGCAACAAATAATCTTAGTGGTGAAATACCAAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTGGGCTTGCGAGGGAACAATTTGGTTGGTTCACTGTCCCCAGATATGTGTCAGTTAACTGGGTTGTGGTATTTTGATGTGAAAAACAATAGCTTGACAGGAAGTATTCCTGAAAACATAGGCAACTGTACCTCCTTCCAAGTTTTGGATTTATCTTACAACGAGCTAACTGGGGAGATTCCATTCAATATCGGGTTTCTTCAAATAGCAACCTTGTCATTGCAAGGCAATAAACTTTCTGGACATATTCCACCGGTGCTTGGTCTCATGCAAGCACTTGCTGTGTTAGACTTGAGTCTTAACATGTTAACTGGATCAATCCCTCCTATTTTGGGTAATTTGACTTACACAGAAAAATTGTACTTGCATGGAAATAAGCTGACTGGCTTCATCCCACCGGAGCTTGGAAATATGACAATGCTTCATTATTTGGAACTGAATGATAATCTCCTAAGTGGACATATCCCTCCCGAGCTTGGAAAGCTTTCTGCTCTATTTGACTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCCGGTGATATTAGCTCGTGTACAAGCCTTAACAGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCTGCTACTTTTCATAGCTTGGAGAGTATGACTTCTTTGAAGCTTTCGTCAAACAACCTTCAAGGCCCCATTCCAATTGAATTGTCACGGATTGGAAATTTGGATACATTGGATATTTCAAACAACAAAATATCTGGACCAATTCCTTCTTCCCTCGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAACAATTTAACAGGACCTATTCCAGCCGAGTTTGGTAATCTCAAAAGTGTTATGGACATTGATCTTTCCCATAACCAACTCTCTGACATTATTCCTGTTGAACTTGGTCAGCTTCAGAACATAGCATCATTGAGGCTTGAAAACAATGACTTAAATGGGGACGTGACGTCACTTGTAAATTGTCTTAGTCTTTCTCTGCTTAATGTGTCCTATAACCAGCTAGTTGGTCTTATGCCCACAAGCAACAACTTCACCAGGTTTTCACCAGACAGTTTCATTGGAAACCCTGGTCTTTGCGGTGATTGGCTGAAGTCTCCATGTCAAGGTTCTCATTCTACGGAACGAGTTACTTTATCTAAGGCCGCTATTCTGGGAATTACTCTTGGTGCCCTTGTAATTCTTCTTATGATACTGCTGGCTGCTTGCCGACCCCACCATCCGCCTCCGTTTCCGGATGGATCACTCGAGAAACCAGGTGACAAATCAATTATTTTCTCACCTCCAAAGCTAGTGATTCTTCATATGAACATGGCACTTCATGTGTATGACGATATCATGAGGATGACCGAAAACCTGAGTGAGAAGTATATAATTGGAAGCGGTGCATCGAGTACTGTTTATAAATGTGTTCTTAAAAATTGCAAGCCAGTTGCCATAAAGAGGCTCTATTCTCACTATCCGCAATACTTGAAAGAATTTGAGACCGAACTGGCCACAGTCGGCAGCATTAAACACCGAAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCACCATATGGCCACCTTCTCTTTTATGACTACATGGAAAATGGTAGTCTATGGGATCTTCTTCATGGACCGAGTAAGAAGAAAAAACTTGATTGGCATCTGCGTCTAAAAATAGCACTTGGAGCAGCGCAAGGGCTTGCATATTTACATCATGATTGCAGTCCTCGCATCATCCACAGGGATGTGAAGTCTTCAAATATTTTACTAGACGCAGATTTTGAGCCGCATCTCACGGATTTTGGTATTGCCAAAAGCCTATGCCCTACAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGATACATAGACCCTGAGTATGCCAGAACTTCCCGACTCACTGAGAAGTCCGATGTCTACAGCTATGGTATTGTTTTGCTTGAATTGCTAACTGGAAGAAAAGCTGTTGACAATGAGTCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACGGTTGATCCCGACATAACTGCCACATGCAAGGACCTAGGAGCTGTAAAGAAAGTTTATCAGCTTGCTCTATTATGCTCGAAGAGGCAGCCAGCCGATAGACCAACGATGCATGAAGTTTCGCGCGTATTAGGAAGTCTCGTGCCGTCAATCACTCCTGCAAAACAACTAACTCCTCTACAGCCGGCATCTCATCCATCCGCCAAAGTGCCGTGCTACATGGATGAGTATGCAAATCTCAAGACACCTCACTTGGTGAACTGTCCTTCCATGAGTACCTCAGATGCTCAACTCTTCCTCAAATTTGGAGAAGTAATCTCTCAAAACAGTGAATGA 2958 0.4158 MAFQFGVLFVLVLLSCFNVNSVDSDDGSTLLEIKKAFRDVDNVLYDWTGSPTSDYCAWRGVTCDNVTFNVIALNLSGLNLDGEISPAIGRLQSLVSIDLKENRLSGQIPDEIGDCSLLQSLDLSFNEIRGDIPYSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKFLDLATNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVKNNSLTGSIPENIGNCTSFQVLDLSYNELTGEIPFNIGFLQIATLSLQGNKLSGHIPPVLGLMQALAVLDLSLNMLTGSIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTMLHYLELNDNLLSGHIPPELGKLSALFDLNVANNNLEGPIPGDISSCTSLNSLNVHGNKLNGTIPATFHSLESMTSLKLSSNNLQGPIPIELSRIGNLDTLDISNNKISGPIPSSLGDLEHLLKLNLSRNNLTGPIPAEFGNLKSVMDIDLSHNQLSDIIPVELGQLQNIASLRLENNDLNGDVTSLVNCLSLSLLNVSYNQLVGLMPTSNNFTRFSPDSFIGNPGLCGDWLKSPCQGSHSTERVTLSKAAILGITLGALVILLMILLAACRPHHPPPFPDGSLEKPGDKSIIFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELATVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGPSKKKKLDWHLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPTKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETVDPDITATCKDLGAVKKVYQLALLCSKRQPADRPTMHEVSRVLGSLVPSITPAKQLTPLQPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2226 985 SMART LRR_typ_2 282 306 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 211 235 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 91 115 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 163 187 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 474 498 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 450 473 IPR003591 -
Mal6g2226 985 SMART LRR_typ_2 330 354 IPR003591 -
Mal6g2226 985 Gene3D Ribonuclease Inhibitor 262 576 IPR032675 -
Mal6g2226 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 8 972 - -
Mal6g2226 985 Gene3D Transferase(Phosphotransferase) domain 1 728 929 - -
Mal6g2226 985 SMART serkin_6 652 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2226 985 Gene3D Phosphorylase Kinase; domain 1 628 727 - -
Mal6g2226 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Mal6g2226 985 Pfam Protein kinase domain 655 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2226 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 972 - -
Mal6g2226 985 Gene3D Ribonuclease Inhibitor 188 261 IPR032675 -
Mal6g2226 985 ProSiteProfiles Protein kinase domain profile. 652 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2226 985 SUPERFAMILY RNI-like 204 536 - -
Mal6g2226 985 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mal6g2226 985 SUPERFAMILY L domain-like 53 276 - -
Mal6g2226 985 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Mal6g2226 985 Pfam Leucine rich repeat 380 439 IPR001611 GO:0005515
Mal6g2226 985 Pfam Leucine rich repeat 452 511 IPR001611 GO:0005515
Mal6g2226 985 SUPERFAMILY Protein kinase-like (PK-like) 630 917 IPR011009 -
Mal6g2226 985 Gene3D Ribonuclease Inhibitor 23 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2226 Mal-Chr6 51798065 51805001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2226 93 984 Receptor kinase-like Gene Family AT5G07180 64.390 0.0 1120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Mal6g2226 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2226 K20718 - gmx:100782307 1709.89