Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2203 ATGACAGAGAGGAATCCCATAGCAGCAGATTCATCACCTGACAGTGATTTTTGGCCTCTTGAAATCTCTGACTACTTGAGTTTCAATGAAAACCAGTGGCTACACGATGATCCCACTACTGATCAGTCTTTTGTTTATCAAACCAACCAAGTAGCTGGTGGAAGCCACATTGAGGGGTCTGCTAGTTCTACCAGGGATACTAATACTACCATGAGTGGAGGAGAGAATTGGAAGAAGGAAGTTAAGGAGAGATTTGCATTCAGAACAAAGTCACAGATTGAAATACTTGATGATGGATACAGATGGAGGAAGTATGGAAAGAAAATGGTCAAGAACAGCCCCAATCCAAGGAATTATTATAGATGTTCGGTGGAGAGATGTCCTGTAAAAAAGAGAGTTGAGAAAGATAAGGATGATTCAAGGTATGTGATAACAACCTATGAAGGCATGCACACCCACCCAAATTCTTGCTAG 474 0.4135 MTERNPIAADSSPDSDFWPLEISDYLSFNENQWLHDDPTTDQSFVYQTNQVAGGSHIEGSASSTRDTNTTMSGGENWKKEVKERFAFRTKSQIEILDDGYRWRKYGKKMVKNSPNPRNYYRCSVERCPVKKRVEKDKDDSRYVITTYEGMHTHPNSC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2203 157 MobiDBLite consensus disorder prediction 54 75 - -
Mal6g2203 157 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 156 IPR044810 GO:0003700
Mal6g2203 157 SMART WRKY_cls 96 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g2203 157 Gene3D WRKY domain 83 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g2203 157 ProSiteProfiles WRKY domain profile. 91 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g2203 157 SUPERFAMILY WRKY DNA-binding domain 89 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g2203 157 Pfam WRKY DNA -binding domain 97 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g2203 157 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2203 Mal-Chr6 51322252 51323332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2203 16 153 WRKY Transcription Factor Family AT5G26170 47.436 2.35e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal6g2203 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2203 - - gmx:100819462 186.037