Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2196 ATGTCTTTCCATGGTATCAATAAACCACATATAAACCTCGTCATGGTGGCTGTAGGCAAACACAAGAATAGTGGTCATGCATTTCGTTGGACAACTAATAATATTGATAATCCTATCATCATTGCAGTCCATGTTAAACATAAAGGCATTCCTCATCGTAGAAAATTTAGAGGCCAAGATGATGTACCAACAGCCATAATGAAATCAGCTCCAGATTATAGTTCAGTTTATGTAATTTCAAAAGGAAAGGTAGTGGAATCTCGACCAGCAATAGTCCCATTGGGAACTGTGGTTTCACAATCACATGCAATAACACCTTGTAAATCAGAAAATGACATAAGGCACACATTTAGAAGAGGAGGAAGCACTAATAGTAGATCAGGAAGATCCATATATGAGATGCTAAAGAGTTTTTCATCGAATAAACAATCATTGGAGAGTATTGATTTATCTAGTCGTAGTCAAAGGTCACCACCATTTAGCCACAATTCAAGCTTAAATGGCTCATCTGGGTCACATAAATTTGGTTCATTGAATGTAGCAAAATTAGAGAGGGATCTTTCAAGCTTAGCATCAGATTCTCAATCAGTAGGAGAAATGGAAGCAGAGATGAAAGAATTGAGACTCAAACTTAGGCAAACTATGAACATGTACAAAATAGCTTGCAAAGAAGCAATTTCAGCCCAAAATAAGGCTAATGAGATTAATCAATGGAAAATGGAGGAGGCAAGAATGGTTGAGGAAGTTATGATGTCAAAAGACGCAGCATTGGCATTAGCAGAAAAGGAGAAAGCTAAAGCAAAAGCTGCAATTAAAGCAGCTGATGAAGCTATGAAAATAGCAGAAAAAGAAGCACAAAGAAGATTGCATGCAGAGAGGAAGGCTAGGAAAGATATAGAAGAGAAAGATCAAGCATTAAATGTGTTGGCTCGTAAAGATATTCGATATAGACAATACACCTTAGAGGAAATTGAAACTGCTACTCAAAATTTCTCATTATCGATGAAAATAGGTGAAGGTGGATATGGACCTGTTTTTAAAGGTCAACTTGATCATACACATGTTGCAATCAAAATTTTAAGACCTGATGCTAACCAGGGTAGAAAACAGTTTCTACAAGAGGTTGAGATATTATGCAACATAAGACATCCAAATATGGTCCTGCTCCTTGGTGCATGTCAAGAATATGGATGCTTGGTATATGAATACATGGACAATGGTAGCCTAGAAGACAGATTATTAAGAAAACAAAACAGCCCTCCAATTCCATGGCAAAAACGTTTCGAAATAGCGTATGAAATTGCAACAGCACTTCTTTTCCTTCACCAATCAAAACCAGAAGCAATTGTTCATAGAGACCTTAAACCAGCAAACATTCTCTTAGACAAAAATTTTGTTAGCAAAATAAGTGATGTTGGTTTATCAAGATTAGTACCACCTTCTGTAGCTGATACTGTCACACAATATCACATGACTGCAGCAGCTGGAACATTATGTTACATTGATCCAGAGTATCAAAATACAGGAAAATTAACAACAAAATCAGATATTTATTCTTTAGGGATAATGTTTCTTCAAATTGTCACAGTTAAGCCTGCAATGGGACTTTCTCATCATGTTAAAAGGGCAATTGAAAATGGGAATTTTATTGATATGCTTGATCCTGTTATTACTGATTGGCCTGTTGATGAAGCTTTGGTGTTTGCTAAACTTGCTTTGAGATGTGCTGAGCTTAGTAAGAAAGATAGACCGGATCTTGCGTTAGAAGTGATTCCGGAGCTTACTCGATTAAGAGATTTTGGATGTAAGTACCAGAACTATCAACAGAATCATAATCATGCATTGCGTCCTCCTCAAAATCCACTTTGA 1869 0.3654 MSFHGINKPHINLVMVAVGKHKNSGHAFRWTTNNIDNPIIIAVHVKHKGIPHRRKFRGQDDVPTAIMKSAPDYSSVYVISKGKVVESRPAIVPLGTVVSQSHAITPCKSENDIRHTFRRGGSTNSRSGRSIYEMLKSFSSNKQSLESIDLSSRSQRSPPFSHNSSLNGSSGSHKFGSLNVAKLERDLSSLASDSQSVGEMEAEMKELRLKLRQTMNMYKIACKEAISAQNKANEINQWKMEEARMVEEVMMSKDAALALAEKEKAKAKAAIKAADEAMKIAEKEAQRRLHAERKARKDIEEKDQALNVLARKDIRYRQYTLEEIETATQNFSLSMKIGEGGYGPVFKGQLDHTHVAIKILRPDANQGRKQFLQEVEILCNIRHPNMVLLLGACQEYGCLVYEYMDNGSLEDRLLRKQNSPPIPWQKRFEIAYEIATALLFLHQSKPEAIVHRDLKPANILLDKNFVSKISDVGLSRLVPPSVADTVTQYHMTAAAGTLCYIDPEYQNTGKLTTKSDIYSLGIMFLQIVTVKPAMGLSHHVKRAIENGNFIDMLDPVITDWPVDEALVFAKLALRCAELSKKDRPDLALEVIPELTRLRDFGCKYQNYQQNHNHALRPPQNPL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2196 622 MobiDBLite consensus disorder prediction 146 171 - -
Mal6g2196 622 SMART serkin_6 331 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2196 622 Gene3D Phosphorylase Kinase; domain 1 309 403 - -
Mal6g2196 622 ProSiteProfiles Protein kinase domain profile. 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2196 622 Pfam Protein tyrosine and serine/threonine kinase 333 548 IPR001245 GO:0004672|GO:0006468
Mal6g2196 622 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
Mal6g2196 622 SUPERFAMILY Protein kinase-like (PK-like) 314 586 IPR011009 -
Mal6g2196 622 Coils Coil 257 302 - -
Mal6g2196 622 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 53 - -
Mal6g2196 622 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 54 620 - -
Mal6g2196 622 PANTHER OS02G0152300 PROTEIN 9 53 - -
Mal6g2196 622 PANTHER OS02G0152300 PROTEIN 54 620 - -
Mal6g2196 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Mal6g2196 622 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2196 Mal-Chr6 51205016 51208982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2196 30 601 Receptor kinase-like Gene Family AT5G12000 57.071 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal6g2196 PK_Tyr_Ser-Thr 8.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2196 - - gmx:100786386 660.218