Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2179 ATGGATCAAGATATTTTAGATGAAGTAGTAATCTTGGAAGAACCAGCTATAGCTGATATTCAAAGATTAATGGAGCTTACAAACAATACAGATCAAGGATCTTCTCAGTTAGCTTATCTCGCGAAACATTGGGAGTATAAGCAGGCGAATGTAGTTCGCCTTCTTCGAGAAGAGCTCGACAACCTTAGCAAACAAAGGGAGGAAGTTGAGCTTAGAAAGCTGGAGATACTTGAAGACAATAATCGATTCGAGGAAGAAAGTAATGGTAGAGACAAACGTCCGGATTCAATAGTGGATGATGTTGCAATAACGAAAAACAATGTTATTCAAAACAGGAAAGTTGAAATTGAGGCTGAGTATGATGCTGTTTACTGGAAACATCGGTCGCGAGATTTGGAAAAACAGTTGGAGGCAAGTATTTGGAGAGAGGAGATATTAAAGGAAAAGTTGCAAGAAAGTATAGAGACTGTTGAAAGACAATCCTCACCTGTGGAGGAACTATCACAGATTCTTAAGAGAGAATATAATTTCTTACATTTAATACTTCAAAATGCACCTTTTGTTATGGGCCATCAGGACAAAGAGTTGTGCTATCGCTTTATCTATAATCATTTTCCAAGTTTACAAGAAGAGGACATCATAGGAAAAACGGAGGTTGAAATTTTCTCGGGATCAGGTGCGAAGGAATCTCAAGATTTTAAGATAGAAGTAATGGAGAAAGGATTACCTGCAAAAAAAGAAATAACTTATGAGACAGAACTATTTGGATCAAAGACATTTTTGATGTATGTCGAACCTGTGTTTAGCAAGATAGGTGAAACAATTGGGGTAAACTATGTGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAAAATGGCAAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCCAAAGAAACAGAACTTAATAAAACCATTCAAATTACAGAGGAGACAATGAGAACAAAAGAAATGTTGGCAACAATGTCTCATGAGATAGGATCTCCACTTTCTGATGTTATTAGCATGGCGAAAATTCTTACTACAACAAAACTTGATAGTGAGCAAAGAAAGCTCTTAGATGTCATGATATCGTCAGGAGATTTGGTTCTTCAACATATTAATGATATACTTGATCCTTCCAAGGTTGAGTAA 1161 0.3643 MDQDILDEVVILEEPAIADIQRLMELTNNTDQGSSQLAYLAKHWEYKQANVVRLLREELDNLSKQREEVELRKLEILEDNNRFEEESNGRDKRPDSIVDDVAITKNNVIQNRKVEIEAEYDAVYWKHRSRDLEKQLEASIWREEILKEKLQESIETVERQSSPVEELSQILKREYNFLHLILQNAPFVMGHQDKELCYRFIYNHFPSLQEEDIIGKTEVEIFSGSGAKESQDFKIEVMEKGLPAKKEITYETELFGSKTFLMYVEPVFSKIGETIGVNYVGMEITDQVRKREKMAKLREEIAVQKAKETELNKTIQITEETMRTKEMLATMSHEIGSPLSDVISMAKILTTTKLDSEQRKLLDVMISSGDLVLQHINDILDPSKVE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2179 386 Gene3D - 318 386 - -
Mal6g2179 386 SMART HisKA_10 323 386 IPR003661 GO:0000155|GO:0007165
Mal6g2179 386 Gene3D PAS domain 163 300 - -
Mal6g2179 386 Coils Coil 140 160 - -
Mal6g2179 386 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 319 386 IPR036097 GO:0000155|GO:0007165
Mal6g2179 386 Pfam His Kinase A (phospho-acceptor) domain 326 386 IPR003661 GO:0000155|GO:0007165
Mal6g2179 386 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 2 386 - -
Mal6g2179 386 CDD HisKA 325 384 IPR003661 GO:0000155|GO:0007165
Mal6g2179 386 Coils Coil 52 86 - -
Mal6g2179 386 Coils Coil 294 314 - -
Mal6g2179 386 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 2 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2179 Mal-Chr6 50984483 50986479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2179 2 386 Histidine Kinase Gene Family AT5G10720 61.929 4.78e-155 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2179 - - mtr:MTR_1g014670 611.683