Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2178 ATGGTTTGTGAGATGGAGAGTGATTGTATTGAAGACATGATGGACATTGAAGTTTTATCATCAATGTGGCCAGAAGATGTTGGAAATGATGTTGGAAAACAATTCAACATAGAAAAACCAGGAAGAGACCAAGATATGTTGGAAGAAGTAACAATCTTAGAAGAACCAGCTATAGCTGATTTTCAAAGATTAATGGAGCTTACAAATTATACAGATAAAGGGTCATCTCAATTGGCATATTTAATGCAACATTGGGAGTATAAGCAGGCGAACGCGGTTCGACTTCTTCGAGAAGAGCTCGACAACCTCAGCAAACAAAGGAAGGAAGTTGAGCTTAGAAAATTGGAGATACTTAAAGAGAATAATCGATTCGAGGAAGAGATCAGTTATGGGGGAGACAAACGTCCGGTTTCGATATTAGACGATGCTTATTATACATGGCAAGATCTACCGGCGGCGATAAGGAAAAGTGATGTTGTTGTCCAAAACAAGAGAATTGAAATTGAGGCTGAGTATGATACTGTTGTTTACTGGAAACATCGGTCGCAAGATTTGGAAAGACAGTTAGAGGCAAGTTTTCGGAGAGAGGAGATATTAAAGGAGAAATTGCAAGAAAGTATTGAGACTGTTGAAAGACAATCCTCACCTGTGGAGGAACTGACACAGATTCTTAAGAGAGCAGATAATTTCTTACATTTTATACTTCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGTTTTATCTATAATCATTTTCCAAGTTTACAAGAAGAGGACATCATAGGAAAAACAGATGTCGAAATTTTCACGGGAGCAGGTGTGAAGGAGTCTCAAGATTTTAAGAGAGAAGTAATGGAGAAAGGAGTACCTGCGAAAAAGGAAATAACTTTTGAGACAGAACTATTTGGTTTCAAGACATTTTTGATATATGTTGAACCTGTGTTTAGCAAGGCAGGTGAAACAATTGGAGTAAACTATATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAAAATGGCAAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCAAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACAATGAGAGCAAAACAAATGTTGGCAACAATGTCTCATGAGATAAGATCACCACTTTCTGGTGTTGTAAGCATGGCTGAAATTCTTACTACAACAAAACTTGATAAAGAGCAAAGACAGCTATTGGATGTAATGATATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGATATACTTGATCTTTCCAAGGTTGAGTCAGGAGCTATGAAATTGGAAGCTACCAAATTCAGGCCAAGAGAGGTAGTAAGACATGTACTCCAGACAGCTGCAGCATCATTGCAGAAAATGTTAACATTGGAAGGAAATATAGAAGATGATATACCTATTGAGGTCACGGGAGATGTTTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCTGTCAAGTTTACGCATCAAGGCAAAGTCGGCATAAACCTTTATGTTGTTCCAGAGCCAGCATTTGCCAAAGAAGAAGAATCAAACCAAAAGGTGACAGAAGACCAGTCAACTATTTCAGCAAATGGATTGAAGGTAGAGAAACATACATCATCACCAAGAAGTACTAGATGTGATCAAAATCTTATTGATGATAGAAAACACACTGACCATCCAATCCAGAATCATGCATTTAGCAATGAATGTAGATCTTCATTTAACAGTGAATGCTCAATGAATGACGATACTGAGGAACAAACTCATTCGACTGAAACAACAGTGTGGATACGTTGCGATGTGTATGACACAGGAATTGGCATACCAGAAAAGGCTATACCTACTTTATTTAGGAGGTACATGCAAGTCAGTGCAGACCATGCTCGAAAATATGGAGGCACCGGTCTAGGACTCGCAATATGTAAACAACTGGTTGAGTTAATGGGAGGTCGTCTAACAGTGACTAGCAAAGAACATAGTGGTTCTATCTTCACATTCATACTACCATACAAAGTTTCGACAGCTTGTGATAATTCTGATGATCCAGATGAGCTATCAGATGTCGATAACAACGAAGACGACACAACTGAAGGATTCTTCCAATTCCAACCACGAACGTTGGGCTCTCTTTTCACTTCTAATGGATCCACCAGGCCACACAGAATCTCACACAAATTCAATGGTTTTCCAGACAATTCTTACTCAAACCTCTCTAATAACATCATTTCAAATGGAACAAATTCACTTGAGGATGCAACTTCAGTTATTGTTGATGCTTCAGATATGTCTGAATCAACAAGTTCATCAAGTCATAACTCAGAAATAAAGCATGAAAATTTAGTTAATGGAAACAAACAGAACCATGGTAATAATAAGGCACATGCTATGCTACAAAATGGTAGTGCAAACTCTAGTCAATGTAAGGAAGCAAGTAGAGAAATGAATTTAGAAACAAAGTCAAGTGAACCACAGCAAACGTGCCAGGGTCAACGGCAGGAAGATAGTACTAGTAGCACTAGCACATCATCAGAAGCAACCAAATCGACGTTAAAGCCGGATATTCTTCTTGTTGAAGATAACAAGATTAATATCATGGTGACAAGGTCAATGATGAAGCAGCTAGGATATAGCATGGATGTTGTGAATAATGGAGTGGAAGCCATACGCGCAGTTCAGAGCCATTCTTACGACATTATTTTGATGGATGTTTACATGCCAGTAATGAATGGTCTTCAAACAACAAAACTGATTAGGTCTTATGAGGAAACGGGCAATTGGGATGCTGCAAGAGAAGCTGGAGTTGAACAAAATTTATCAGCTTCAGATGAATGTTCCGTGCCACCTAAAAAGCACATCCACATTGTTGCGATGACAGCAAACACAATGTCAGAGAGTGCTGAAGAATGTTTCGCCAATGGTATGGATGCGTTTGTGTCGAAACCAGTGACATTCCAAAAAATGAAAGAGTGTCTTGAAAAGTATCTAAGGTGA 3033 0.3848 MVCEMESDCIEDMMDIEVLSSMWPEDVGNDVGKQFNIEKPGRDQDMLEEVTILEEPAIADFQRLMELTNYTDKGSSQLAYLMQHWEYKQANAVRLLREELDNLSKQRKEVELRKLEILKENNRFEEEISYGGDKRPVSILDDAYYTWQDLPAAIRKSDVVVQNKRIEIEAEYDTVVYWKHRSQDLERQLEASFRREEILKEKLQESIETVERQSSPVEELTQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGAGVKESQDFKREVMEKGVPAKKEITFETELFGFKTFLIYVEPVFSKAGETIGVNYMGMEITDQVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILTTTKLDKEQRQLLDVMISSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVRHVLQTAAASLQKMLTLEGNIEDDIPIEVTGDVLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPAFAKEEESNQKVTEDQSTISANGLKVEKHTSSPRSTRCDQNLIDDRKHTDHPIQNHAFSNECRSSFNSECSMNDDTEEQTHSTETTVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHSGSIFTFILPYKVSTACDNSDDPDELSDVDNNEDDTTEGFFQFQPRTLGSLFTSNGSTRPHRISHKFNGFPDNSYSNLSNNIISNGTNSLEDATSVIVDASDMSESTSSSSHNSEIKHENLVNGNKQNHGNNKAHAMLQNGSANSSQCKEASREMNLETKSSEPQQTCQGQRQEDSTSSTSTSSEATKSTLKPDILLVEDNKINIMVTRSMMKQLGYSMDVVNNGVEAIRAVQSHSYDIILMDVYMPVMNGLQTTKLIRSYEETGNWDAAREAGVEQNLSASDECSVPPKKHIHIVAMTANTMSESAEECFANGMDAFVSKPVTFQKMKECLEKYLR* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2178 1010 CDD HATPase_EvgS-ArcB-TorS-like 492 683 - -
Mal6g2178 1010 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 1009 - -
Mal6g2178 1010 SMART REC_2 866 1005 IPR001789 GO:0000160
Mal6g2178 1010 Gene3D - 858 1010 - -
Mal6g2178 1010 Pfam His Kinase A (phospho-acceptor) domain 378 441 IPR003661 GO:0000155|GO:0007165
Mal6g2178 1010 Coils Coil 182 213 - -
Mal6g2178 1010 ProSiteProfiles Response regulatory domain profile. 867 1009 IPR001789 GO:0000160
Mal6g2178 1010 ProSiteProfiles Histidine kinase domain profile. 383 686 IPR005467 -
Mal6g2178 1010 Gene3D - 364 441 - -
Mal6g2178 1010 SMART HKATPase_4 487 686 IPR003594 -
Mal6g2178 1010 Coils Coil 347 367 - -
Mal6g2178 1010 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 375 441 IPR036097 GO:0000155|GO:0007165
Mal6g2178 1010 Gene3D PAS domain 217 353 - -
Mal6g2178 1010 MobiDBLite consensus disorder prediction 795 862 - -
Mal6g2178 1010 SUPERFAMILY CheY-like 866 1010 IPR011006 -
Mal6g2178 1010 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 1009 - -
Mal6g2178 1010 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 684 IPR003594 -
Mal6g2178 1010 Gene3D - 442 690 IPR036890 -
Mal6g2178 1010 PRINTS Bacterial sensor protein C-terminal signature 670 683 IPR004358 GO:0016310|GO:0016772
Mal6g2178 1010 PRINTS Bacterial sensor protein C-terminal signature 611 625 IPR004358 GO:0016310|GO:0016772
Mal6g2178 1010 PRINTS Bacterial sensor protein C-terminal signature 646 664 IPR004358 GO:0016310|GO:0016772
Mal6g2178 1010 CDD REC_hyHK_CKI1_RcsC-like 868 1005 - -
Mal6g2178 1010 Pfam Response regulator receiver domain 868 936 IPR001789 GO:0000160
Mal6g2178 1010 Coils Coil 93 127 - -
Mal6g2178 1010 SMART HisKA_10 376 441 IPR003661 GO:0000155|GO:0007165
Mal6g2178 1010 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 455 683 IPR036890 -
Mal6g2178 1010 CDD HisKA 378 437 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2178 Mal-Chr6 50965766 50970773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2178 1 1009 Histidine Kinase Gene Family AT5G10720 56.641 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g2178 HATPase_c 7.2e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2178 - - cam:101512841 1739.93