Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2157 ATGCAAATACAAATATCTCAGTTTGGTGGGACATTTAGCTGCCCAATTCCAACAAACTTTGATGGCATTGACTACATTGCTAAGAATATTCGCTTAGCTCTCTCAAACACCAACCTTCATGGAAAACTATCCATTTCTGCTTATGGAAACACCGACCTCATCCCTGGTGAGGTTCAAAATGCGCTTCAGCGCACTGGCATCTCCCTTCATCACGTCCCCACCGGAGGTGGGTACGAAGAGATCATGAACGATATGATAGCGTGGATGTTGGACAATCATCCCCCTGCAAATTTTCTGTTGATTTCGGGCGATGATAGTTTCTCAGAACTTCTTCATAACTTTTCTTTGATAAGGTACAACATTCTTCTTTCTGGACCTTCACAACTTGACGAATCACTCACCTCGGCTGCCAATGTAATATGGCTTTGGACCACACTCATTTCTGGCGGGAGGCCTCTAAACATTGCTGAACAGTTGCCATCATCATCATCATCGCAAGTGCAGGGCGGGGAAAGCAGCATCTAG 525 0.4514 MQIQISQFGGTFSCPIPTNFDGIDYIAKNIRLALSNTNLHGKLSISAYGNTDLIPGEVQNALQRTGISLHHVPTGGGYEEIMNDMIAWMLDNHPPANFLLISGDDSFSELLHNFSLIRYNILLSGPSQLDESLTSAANVIWLWTTLISGGRPLNIAEQLPSSSSSQVQGGESSI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2157 174 Pfam NYN domain 14 140 IPR021139 GO:0004540
Mal6g2157 174 CDD PIN_limkain_b1_N_like 13 126 - -
Mal6g2157 174 PANTHER ENDONUCLEASE OR GLYCOSYL HYDROLASE WITH C2H2-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED 14 165 - -
Mal6g2157 174 PANTHER LIMKAIN B LKAP 14 165 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2157 Mal-Chr6 50654046 50654785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2157 13 157 C2H2 Transcription Factor Family AT5G61190 45.946 8.92e-37 132