Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2154 ATGGAGGAAGTGAAAGCACACATGTTATTTGGAAAGTACGAGATGGGAAGAGTACTAGGTAAAGGAACATTTGCAAAAGTGTACTATGCCAAAGAAATTGCAACGGGTGAAGGTGTAGCAATTAAGGTTGTAGACAAAGACAAAGTGAAAAAAGAAGGCATGATGGAACAAATCAAACGTGAAATTTCCGTGATGAGGTTAGTAAAACATCCAAACATCGTCAACCTTAAAGAAGTTATGGCAACAAAAACCAAAATCTTGTTCGTCATGGAATATGCACGTGGCGGCGAATTATTCGAGAAAGTTCGAAAAGGTAAATTTAAAGAAGAACTTGCAAGAAAGTACTTCCAACAGCTTATAAGCGCGGTAGATTATTGTCATAGCCGAGGTGTTTCTCATCGAGATTTAAAACCGGAGAATTTGTTACTCGATGAAAATGAGAATCTTAAAGTCTCTGATTTTGGTCTCTCCGCTTTGCCTGAACAGCTTCGTCAGGACGGACTTTTACATACTCAATGTGGGACTCCTGCTTACGTGGCACCCGAGGTAGTTAGAAAAAGAGGTTATAACGGTTTTAAAGCTGATACTTGGTCTTGTGGTGTTATTCTTTATGCTTTACTTGCTGGATTTTTACCTTTTCAACATGAAAATTTAATTTCCATGTATAATAAAGTTTTCAAAGAAGAATATCAATTTCCACCTTGGTTTTCTCCTGAATCAAAGAGATTAATCTCGAAGATTCTTGTGGCAGATCCCGAAAGAAGAATTACTATTGCTTCAATCATGGATGTTCCCTGGTTTCGAAAAGGTTTATCGTCACTATCAACAATTAGTACTTCAAATGATGATTTGGACTTGGAGTCCAAGGTGAATTCGATTAATTCTCCGCCACAATACTTCAATGCGTTCGAGTTTATTTCTTCGATGTCTTCGGGGTTTGATCTTTCGGGTTTGTTCGAGGAAAAGAAGAAAAGGGGTTCAGTTTTTACTTCAAAGTGTTCTGTTTCGGAAATTGTGACAAAAATTGAAAGTACCGCGAAAAAGTTAAGGTTTAAGGTTAAGAAGGTGAAGGATTTCAAATTGAGGTTACAAGGGTTGATTGAAGGTAGAAAGGGAAAATTGGCCGTGACGGCGGAGATATATGAGGTGGCGCCGGAGCTTGCGGTGGTTGAATTTTCTAAAAGTTCCGGTGATACTTTTGAATATGTCAAGTTGTTTGAAGATGTTAGGCCTGCTCTCAAAGACATTGTTTGGTCATGGCAAGGGGAATGA 1272 0.3852 MEEVKAHMLFGKYEMGRVLGKGTFAKVYYAKEIATGEGVAIKVVDKDKVKKEGMMEQIKREISVMRLVKHPNIVNLKEVMATKTKILFVMEYARGGELFEKVRKGKFKEELARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENENLKVSDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVVRKRGYNGFKADTWSCGVILYALLAGFLPFQHENLISMYNKVFKEEYQFPPWFSPESKRLISKILVADPERRITIASIMDVPWFRKGLSSLSTISTSNDDLDLESKVNSINSPPQYFNAFEFISSMSSGFDLSGLFEEKKKRGSVFTSKCSVSEIVTKIESTAKKLRFKVKKVKDFKLRLQGLIEGRKGKLAVTAEIYEVAPELAVVEFSKSSGDTFEYVKLFEDVRPALKDIVWSWQGE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2154 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Mal6g2154 423 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Mal6g2154 423 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2154 423 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Mal6g2154 423 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Mal6g2154 423 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Mal6g2154 423 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Mal6g2154 423 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2154 423 PANTHER - 1 423 - -
Mal6g2154 423 Gene3D Kinase associated domain 1, KA1 294 419 - -
Mal6g2154 423 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2154 423 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 423 - -
Mal6g2154 423 CDD CIPK_C 301 414 - -
Mal6g2154 423 Pfam NAF domain 297 355 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2154 Mal-Chr6 50621285 50622556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2154 2 423 CBL-interacting serine-threonine protein kinases AT5G25110 66.972 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal6g2154 Pkinase 1.3e-75 CL0016