Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2150 ATGAAGCTTCGTGTTGCTCATGTTTGGTGTATACCGGATAAGGAACATCCTAATGAGACACTTTTCATGAATATGCTCTTAGTTGATGAAAAGGCTGGTAGAATCCATGCAACAATTCGAAAGGAGTTGGTGAAGAGTTTTCAAAATAAGATTGAGGAAGGATCCACTTATGAGGTCGAGAATGTTATGGTTGGTTTTAACGAAGGCAAATTTAAACTGACTAAACATAAGTATAAACTGAATTTGATGCAACAATCCAAGTTTACAAAAATTAACGCTCCTGCTATCCCTATGAATTCTTTCGACTTTATGTCATTCAGAGAGATTTTGGATTCATCTGAAGAGGAAAAGATAACAGATGCCATTGGTCACGTTGTTGAGAAGGACATATTGCGAACAACAGAGAAGAATGGCAGGACAAACAGGGTGATAGATCTTACTTTGGAAGATTTGAATCAAAATCGTATTCATTGTTCTCTTTGGGGTGATTTTGCTGAGAAGATTGATAAATACTTTGAAACTCATGATATGTCATCAACCATTGTCTTGATTTTACAATTTTGCAAGACAAGAAAATATATGGGGGCAATGGGAGTTTCCAATTCGTTTTTTGGTTCAAAGGTTATACTAAATGGTGATTTGCCTGAAGTAACCTCATATAAGACCAAAATGAGTAATGGAGAGGTTCAATTAACTCAAGGTGTTAGTCAAATGTCTGGATATTCAAGTGTTTCTGTAGGTGAAGAATTGCTCAATACCAAGAGAATGACAATTGAAAATCTAATTGAATCTACTGAGATGCTAAATTGCAGCAAAAAAGAGCCAAATTTGATTGTGATGAAAATATGGAGGACTCTGATATTCCAAGTAATACAAGTTTTTTTTTTGTTTTGGATGAAAATTATAGTCAAGATCAGGTTTTTGATGTCTTATAGTTGTAGATATTATTGTTTCAAAGGTTATATGTATGGTAGACTTATAGTCACAATTTAA 993 0.3394 MKLRVAHVWCIPDKEHPNETLFMNMLLVDEKAGRIHATIRKELVKSFQNKIEEGSTYEVENVMVGFNEGKFKLTKHKYKLNLMQQSKFTKINAPAIPMNSFDFMSFREILDSSEEEKITDAIGHVVEKDILRTTEKNGRTNRVIDLTLEDLNQNRIHCSLWGDFAEKIDKYFETHDMSSTIVLILQFCKTRKYMGAMGVSNSFFGSKVILNGDLPEVTSYKTKMSNGEVQLTQGVSQMSGYSSVSVGEELLNTKRMTIENLIESTEMLNCSKKEPNLIVMKIWRTLIFQVIQVFFLFWMKIIVKIRFLMSYSCRYYCFKGYMYGRLIVTI* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2150 330 Gene3D - 95 233 IPR012340 -
Mal6g2150 330 Gene3D - 1 93 IPR012340 -
Mal6g2150 330 SUPERFAMILY Nucleic acid-binding proteins 100 229 IPR012340 -
Mal6g2150 330 CDD RPA1_DBD_A_like 1 83 - -
Mal6g2150 330 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 2 254 - -
Mal6g2150 330 Pfam Domain of unknown function DUF223 25 113 IPR003871 -
Mal6g2150 330 PANTHER REPLICATION FACTOR A 1, RFA1 2 254 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal6g2150 330 SUPERFAMILY Nucleic acid-binding proteins 4 90 IPR012340 -
Mal6g2150 330 CDD RPA1_DBD_B_like 120 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2150 Mal-Chr6 50320965 50325231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2150 19 222 Core DNA Replication Machinery Family AT5G08020 26.190 1.10e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2150 - - mtr:MTR_7g451880 323.168