Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2144 ATGGAAAGCAAAACATGCTCTCAACTCCCACCTGGCTTCAGGTTTCATCCAACTGATGAGGAACTAATTGTGTATTACCTTTGTAATCAAGCAACATCACAACCATGTCCTGCATCTATCATTCCAGAAGTGGATATCTATAAATTTGATCCATGGGAATTACCAGATAAATCAGACTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGAGAGAGGAAGTATCCCAATGGGGTGAGACCAAATAGAGCAACTGTTTCTGGTTATTGGAAAGCCACTGGAACAGACAAATCAATCTTTAGTGGGTCTAAGCATATTGGAGTTAAGAAAGCTTTGGTTTTTTACAAGGGTAGGCCACCAAAGGGAATCAAAACAGATTGGATTATGCATGAATATAGGTTAATTGGATCAAGAAGACAAGCTAATAGACAAATTGGGTCCATGAGGCTAGATGATTGGGTCTTATGTAGGATCTATAAGAAGAAGAACATCACAAAATCATTGGAGACAAACGAGGACTACTCAGCAAATCAAATCAATATGACACAAACAAATGATGGTAATAGTGAACAAGAATTGATGAAATTTCCAAGGACATGTTCCTTAACTAATCTTTTGGAGATGGATTATTTGGGACCAATATCACAAATATTATCAGATGGATCATATAATTCAACCTTTGAATTTCAAATTAATACTGCACATGGTGGAATAATAGACCCCTTTGTAAAACCACAAGTGGATGAAATGCCTAATAACAACACTTATGCAGCTGATTTAGAGAAGTACCATGTGAAACAAAATAGCAGCTTTGGGAACCAAGTATTTGATCAAAGGGAATAA 843 0.3618 MESKTCSQLPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFTPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNITKSLETNEDYSANQINMTQTNDGNSEQELMKFPRTCSLTNLLEMDYLGPISQILSDGSYNSTFEFQINTAHGGIIDPFVKPQVDEMPNNNTYAADLEKYHVKQNSSFGNQVFDQRE* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2144 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 3 231 - -
Mal6g2144 280 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Mal6g2144 280 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Mal6g2144 280 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Mal6g2144 280 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Mal6g2144 280 PANTHER NAC TRANSCRIPTION FACTOR 56 3 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2144 Mal-Chr6 50100741 50102251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2144 1 217 NAC Transcription Factor Family AT1G69490 67.544 1.30e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g2144 NAM 3.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2144 - - gmx:732552 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2144 6 50100741 50102251 Mal6g2144 6 50100741 50102251 ECH