Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2139 ATGGGTGATGTTAGTGCTATAGAGACCAACAATAGAATAAGCTTTGATTTGAATGAAAGTTTAATAGAAGATATTGCTTTAGAAAATGGTGATGTTAGTGCTATAGTGAAGGAATTGTTAGTAGTTGATAACATAGGAAGTTATGAGAAAGAAAGCTCTGCTTCATGTTTGAATATTGTAACAAATGAAGAAGGTGATAAAGATGGGTCTAGTAATGAGACAAATTGTGTTCCCTTTGTTGGTCAAATTTTTCTTAGTGAAGAAGAAGCATTTGTCTTTTATAAGAAATATGCTTATCAACAAGGGTTCTCAATAAAAAAGGTAGATTCACAAATAAAAATGGGGTTATCAACATGCGTGATTTTTTTGCCATCAGAGTCATCAAAGTGTGATTGCAAAGCTCATTTACGAATTAAATTGCAAAAGTCTCATGATATATTATCAATTGAGTGGCGAGTTACAACGTTTGTTATTGAACATAACCATGATTTACTAACCCCATCAGAAGTGCGTTTTTTACCGGCTTATCGAACTATCTTAGAAGATGATAGTGAACGTATTTTCTTATTAAAAAAAGGTGGACTTTCAGTTAGACAAATAATGCGTGTTATAGAATTAGAGAAAAATGTGAAGCATGGTTATCTTCCATTTATTGAAAGGGACATTCTTAATCTATTTGTGAAAGCTAATAAAAAAGTTGAAAGAAGTGATGTCATGGATCTTTTGAAAAAGAAGGTTAGAGCATATTTTTGGTCCTCGGCTTCTTGTTTTGATTGGTACCAAAAATATGGCGATGTTGTTGTATTTGATACTACATATAAGGTCAATTCTTATGAAATGCCATTTGAAATTTTTGTGGGTATGAATAATTATGGAAAGACCGTACTTTTTGGATGTGCACTCTTACGGAACGAAACTATGTCTGCATTTCGTTGGCTAATGAAGACTTTTATATCTTTGATGAAGAAGTCACTGAAGACTATATTAACCGATCAAGATCCATGGATGAAAGAAGCAATCTCAAAAGAGTTGTCATCTCAAAAGAGTTGTCATCAACAAAACACAATGTTCTTACTCATTTTTCTTTTCAAAAGTTTCAAGCGGAGTTTGAAAGGTCCGCTAAATATTCAATTGATCATGAAAATGTATTTTTTTCATAAAGATTGTCACGAAATCCCTTCTAACTACTTGTCATCACAGTGGTTGCTTCAAGCATCATTTGATGATAACGAAGTGGAGTCACAAGTTAATGTTGTCATTGATGAGCAAGTAATAGATTGTAACAATGAAGCTCATTCACAACATGTTGTTTATTGTCCTCCAAAATCCAAACCTAAAGGTCGTGAAAGACATAACATTGTCACATGTCCTCTAAAGGAAAAGAAGAAGGCAAACAAGAAGAAGAAAATTTGTGAAGATGCAAATTTAAATCCAATTCTTCTTCCAAAAGTTTAG 1455 0.3265 MGDVSAIETNNRISFDLNESLIEDIALENGDVSAIVKELLVVDNIGSYEKESSASCLNIVTNEEGDKDGSSNETNCVPFVGQIFLSEEEAFVFYKKYAYQQGFSIKKVDSQIKMGLSTCVIFLPSESSKCDCKAHLRIKLQKSHDILSIEWRVTTFVIEHNHDLLTPSEVRFLPAYRTILEDDSERIFLLKKGGLSVRQIMRVIELEKNVKHGYLPFIERDILNLFVKANKKVERSDVMDLLKKKVRAYFWSSASCFDWYQKYGDVVVFDTTYKVNSYEMPFEIFVGMNNYGKTVLFGCALLRNETMSAFRWLMKTFISLMKKSLKTILTDQDPWMKEAISKELSSQKSCHQQNTMFLLIFLFKSFKRSLKGPLNIQLIMKMYFFHKDCHEIPSNYLSSQWLLQASFDDNEVESQVNVVIDEQVIDCNNEAHSQHVVYCPPKSKPKGRERHNIVTCPLKEKKKANKKKKICEDANLNPILLPKV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2139 484 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 366 IPR031052 GO:0006355
Mal6g2139 484 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 65 366 - -
Mal6g2139 484 Pfam MULE transposase domain 266 348 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2139 Mal-Chr6 50010756 50012672 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g2139 MULE 1.5e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2139 - - mtr:MTR_4g035820 482.641