Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2131 ATGGCGATAATAACCGAACTATACCCCAAATTCTTCTTCTCTCAAAACCCAATCCCAAAACCCTTCATAAACCCTAATTTCAATCCCCGAAATTCTTCATCTTATCAAATCTTCAATTTCAACCCAAAATCTCAATTTTCTCACCAATCAACAACCACCACCCCCAATCGTGGCTTAATTTTCCGGGAAAAAGTTCTATACCTTGAAAAACTCAAAGTAAACCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGTTCTTGTCCTTTAAGAACCCTAAAATCTGTAGAACAATGTCTTTCATCAATTGGCATACACAGAAGCCAAATGGGTCGAATTCTAGATATGCTTCCTGAACTTCTCACGTGCGAACCACATGCTGATATTTACCCCCTTCTTGATTTTCTTCTCAATGAGGTTGAAATTCCTTACCATGATGTTCAAAAATCAATCTTGCGGTGTCCTAGATTGTTGGTTAGTAGTGTAGAGAATCGATTACGACCTGCTCTGTGTTTTTTGAGGGAATTAGGGTTTGTTGGGCCACATTCTCTCACGTGCCAGACCACATTGCTTTTGGTTTCGAGTGTTGAGGATACCCTTTTGCCTAAAGTTGAGTTTTTGATGAGTTTGGGGTTCACACGTGTGGAGGTTTCGAATATGGTTGTGAGGTCACCTGGGTTGTTGACTTTTAGTGTGGATAAGAATTTGGCTCCAAAGGTTGAGTTTTTCTTGAATGAGATGAATGGTGATATTGCTGAGTTGAAGAGGTTTCCTCAGTTTTTCTCTTTTAGCTTGGAAGGGAGGATTAAGCCGCGATATGCGATGCTGGTTCAGCTTGGTTTGTCGCTTTCTTTGCGCGAGATGTTGCAGGTTAGTGATGGAGGGTTTGATTCTAGATTGCTTGCATTGCGGTTAAGGGAACTTGAGGGAAGATAA 936 0.4081 MAIITELYPKFFFSQNPIPKPFINPNFNPRNSSSYQIFNFNPKSQFSHQSTTTTPNRGLIFREKVLYLEKLKVNPEKAFKQNPNLRSCPLRTLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPHADIYPLLDFLLNEVEIPYHDVQKSILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKVEFLMSLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKVEFFLNEMNGDIAELKRFPQFFSFSLEGRIKPRYAMLVQLGLSLSLREMLQVSDGGFDSRLLALRLRELEGR* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2131 311 Pfam mTERF 139 296 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 Pfam mTERF 77 178 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 218 250 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 111 143 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 76 106 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 SMART mt_12 182 213 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 43 309 - -
Mal6g2131 311 PANTHER CGI-12 PROTEIN-RELATED 43 309 IPR003690 GO:0003690|GO:0006355
Mal6g2131 311 Gene3D Transcription termination factor 3, mitochondrial 59 309 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2131 Mal-Chr6 49510822 49511757 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal6g2131 mTERF 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2131 K15032 - gmx:100785219 373.629