Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2128 ATGATCTCTTCACATGAAAACCAAAATGTTTACCCTTTTTCATCTTCTCTCTCTTCTTCTTCATTTGCATCTTCTTCTATGCAAATGGTATATGCAGACCTTGGATCTCTCTCTCTTAGGTCAAACTATGGTAGTGTCTTTCCATTTATGAGGGAGTGTCTTTCTAAAAGATTTGAAGACCAACCTAACATGGATGATGATATGAGTGAGGATGGGGAAAACAGTGAGAAAACAAACCATAATATTACTAACTTTAATGATGAGTTAGAAAACCCTAATGGAAGTGGAAAAGATGAAGAGAATGGACAGTCTGGTAAATGTGCAAGAGGGCATTGGAGACCTGCTGAAGATTCCAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAGAACTGGAATCTCATAGCTGAAAAGTTGGAAGGAAGATCAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTGGATCCAAGAATCAACAGAAGAGCATTCAATGAAGAAGAGGAAGAAAGACTAATGCAAGCACATAGAATTTATGGAAACAAATGGGCCATGATAGCTAGACTATTCCCAGGAAGAACAGATAATGCTGTAAAGAATCACTGGCATGTAATAATGGCCAGAAAGTACAGGGAACAATCCAGTGCATTCAGGAGAAGAAGATTGAGCCAAAATGTTTACAGAACAATGGAAACAGAACCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTATGTCAATTTTGCCATATGCTCATGGTGGTGGGGTTGTGTATGGTTTAAATGTTTCACCTCACATGAGTGGTGAGAGAGAAGCTATGCAAGGACCCCTACATTTTGGTTTGTATGCTCAACAAGCACCTTTTGATTTCTTCTCTGGTGGTAGAAACAATGACATGGTGAAAGAATCATTCAATCAAATAAGATATTATTGGGAAGGGACTAATGATGAATATCAACAACAACAACAATATAGTTTCTACCATCATTATCCTCAACAACAATATATGATGACAATGCAGCACCAAAACAACACCAATTTTTACAATTTCTCAAATTCCACAGCATTATCAACACCTCATATTGCAGAAAACAGTGAAAAAGGTCTGATTGGTGACACCCCAGATGCTGTTGAAACTCCTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA 1188 0.383 MISSHENQNVYPFSSSLSSSSFASSSMQMVYADLGSLSLRSNYGSVFPFMRECLSKRFEDQPNMDDDMSEDGENSEKTNHNITNFNDELENPNGSGKDEENGQSGKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFNEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAFRRRRLSQNVYRTMETEPSPPYFLNGAPLGNSMSILPYAHGGGVVYGLNVSPHMSGEREAMQGPLHFGLYAQQAPFDFFSGGRNNDMVKESFNQIRYYWEGTNDEYQQQQQYSFYHHYPQQQYMMTMQHQNNTNFYNFSNSTALSTPHIAENSEKGLIGDTPDAVETPQFFDFLGVGAT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2128 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
Mal6g2128 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 155 IPR017930 -
Mal6g2128 395 PANTHER MYB PROTEIN-RELATED 27 224 - -
Mal6g2128 395 PANTHER MYB PROTEIN-RELATED 255 395 - -
Mal6g2128 395 MobiDBLite consensus disorder prediction 78 100 - -
Mal6g2128 395 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Mal6g2128 395 SUPERFAMILY Homeodomain-like 108 202 IPR009057 -
Mal6g2128 395 CDD SANT 112 153 IPR001005 -
Mal6g2128 395 PANTHER MYB TRANSCRIPTION FACTOR 255 395 - -
Mal6g2128 395 PANTHER MYB TRANSCRIPTION FACTOR 27 224 - -
Mal6g2128 395 Pfam Myb-like DNA-binding domain 112 172 - -
Mal6g2128 395 Gene3D - 109 160 - -
Mal6g2128 395 CDD SANT 163 203 IPR001005 -
Mal6g2128 395 Gene3D - 162 230 - -
Mal6g2128 395 SMART sant 108 157 IPR001005 -
Mal6g2128 395 SMART sant 160 208 IPR001005 -
Mal6g2128 395 MobiDBLite consensus disorder prediction 60 112 - -
Mal6g2128 395 ProSiteProfiles Myb-like domain profile. 104 155 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2128 Mal-Chr6 49351489 49354421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2128 27 289 MYB Transcription Factor Family AT1G69560 48.084 1.48e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g2128 Myb_DNA-bind_6 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2128 K09422 - gmx:100789305 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2128 6 49351489 49354421 Mal6g2128 6 49351489 49354421 ECH