Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2120 ATGAAACTTGTTCCAGGTGGATGTGTTGAAGAGATAGATGAAGGAAGCATGACACCTCATGTATTGACTGTGAACCCTGGAGAGGATGTGGTTGGAAAGATATTTGAATTTTTTCAGAAAGGACCTCAAGCAGATGTTTGCATACTATCTGCTATTGGAACTATATCAAGTGTCATCCTTCACCAATTTGGTGTTTCTAATGGATTTTTAAGATATGAGGGTCGCTTTGAAATTTTATCTTTAAGTGGATCATGCACCTTCATTGGTGGTGCTGCTGGTTGTGCACAAAGGAAAATTGGCGTGTTGAGTGTTTCATTGGCTAAACCTGATGGGAGTGTTTTTGGAGGTGTGTCAGATAATGTCACTACTGTTGGTGATGAAAATGTTCAATCTGATTCTATTAGTGGTTGTTGTATTGATCTTGATAGCCAGAAATTGGAACTTGTAACTTAG 453 0.3863 MKLVPGGCVEEIDEGSMTPHVLTVNPGEDVVGKIFEFFQKGPQADVCILSAIGTISSVILHQFGVSNGFLRYEGRFEILSLSGSCTFIGGAAGCAQRKIGVLSVSLAKPDGSVFGGVSDNVTTVGDENVQSDSISGCCIDLDSQKLELVT* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2120 150 CDD DUF296 18 116 IPR005175 -
Mal6g2120 150 SUPERFAMILY AF0104/ALDC/Ptd012-like 15 117 - -
Mal6g2120 150 PANTHER DUF296 DOMAIN PROTEIN 6 119 - -
Mal6g2120 150 Pfam Plants and Prokaryotes Conserved (PCC) domain 19 117 IPR005175 -
Mal6g2120 150 ProSiteProfiles PPC domain profile profile. 14 150 IPR005175 -
Mal6g2120 150 Gene3D - 19 126 - -
Mal6g2120 150 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 6 119 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2120 Mal-Chr6 49174727 49178465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2120 15 116 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.863 7.09e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2120 - - mtr:MTR_4g055803 161.77