Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2040 ATGGTAGAAACAAAGAAAATTGTTCGAAGTTACAAAAGGAGTTTCAATGGTTTTTCTGCCTTACTCAACGAGCAACAAAAGAAAAAACTTGTTGGAATGAAAGGTGTGGTCTCGATTTTTCCAAGCCAAGAGTTTCACCTTCAAACGACAAGATCTTGGGACTTTCTTGGATTTCCTCAATCAATCAAAAGGGATCAAACAATTGAGAGTGATTTGGTGGTTGGAGTCATAGATACTGGAATTTGGCCAGAATCTGAAAGTTTCAATGACAAAGGTATATGTTTTGGTCCTATTCCAAAAAAGTGGAGGGGGGTTTGTGCAGGCGGTGAAAACTTTAGTTGCAACAACAAGATCATTGGAGCACGATGGTACTCTGGTAGTAGAAATGAAAGTGCAAGAGATTATTTGGGTCATGGAACCCATGCATCATCAATAGCATGTGGAAGAATGGTAAAGGGTATTAGTTATCATGGCCTTGCAAAAGGCACTATAAGAGGCGGAGTCCCATCTTCAAGGATTGCTACATACAAAGTATGTACCCCGAAATGTAGTGATGATAATATTCTAGCTGCATTTGATGATGCCATTGCAGATGGAGTTGACATCATCACCATCTCTCTTGGAAACAACGCTGCTGTTGAATTTCTGAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAGTGCATGCAGCAGGGAACTCTGGTCCTAACCCAAGTACTATTTCAAGTGTAGCACCTTGGTTACTTAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAGGTCATTCTTGGAAATGGAAAGACTTTTATTGGGAATTCGATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGTTGAATGTAATGCTCAAGCTTGCCTTGGAGATTATAAATCCACTAAAAAGTGTTCATGTGTAGATAAAAAAGTAGTGAAGGGTAAGATTGTATTAAGTGATCTAGCGGGTGCAGTATTGGCTTATGAAAATGGGGCAATTGGTGCAATCGTTAATTTTACAGTTGATGTTCCTCATGTCACTCATTGGCCTTCACTTTACTTGGACCCAAAAACCTATGCTCTTGTTCAATCTTACACTAATTCCACCAAATACCCTAAAGCTGAAATATTGAAGAGTGATCTCTTTCAAGATACCACTGCTCCTGAAATTGCACTTTTCTCTTCTCGTGGCCCGAATCCTATAGTTCATGAAATTATGAAACCAGATATTAGTGCTCCAGGTGTGGATATCTTCGCTGCATATTCACCTAACGGGCCAAGCCCTGATGATATGATTGTTAAGCAAAATGAGAAATACAACATATTATCTGGCACCTCGATGGCATGTCCCCATGTTGCTGGAGTTGTTGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGCTATAAAATCAGCAATTATGACAACGGCAAAACCAGTTAATGGAAGTTATGATTTGGTTGGTGAGTTCGCGTATGGATCAGGTAATGTTAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATCACTAAGCAAGATTACATCCAAATGCTTTGTAATTTTGGTTATGATGATACCAAAATTGAACAAATTAGTGGGAAAAAGTCAAGTTGTCATGGAGCTTCTAGTAGATCCTTGGTGAAACAAATAAATTACCCTGCAATGGTGATTTCTGTTGAGCCTCATAAACATTTCAATGTTAAGATTCATAGAACAGTGACAAATGTTGGCTCTCCTAACTCAATCTACAAGGCTACTATCATCCCAATTCCTAAAATCAAGATTAGAGTGAAGCCAAAGATTCTCTCGTTTGGAACCTTAAATGAGAAACAATCTTTTGTTGTCACTCTTGTTGGGAGAGCTAAATTACACAAAACTGTGATTTCCTCATCACTTGTTTGGTCAGATGGGACCCACAATGTGAAGAGTCCAATTTATGTGCAAAGACTCTCTTAA 1998 0.3884 MVETKKIVRSYKRSFNGFSALLNEQQKKKLVGMKGVVSIFPSQEFHLQTTRSWDFLGFPQSIKRDQTIESDLVVGVIDTGIWPESESFNDKGICFGPIPKKWRGVCAGGENFSCNNKIIGARWYSGSRNESARDYLGHGTHASSIACGRMVKGISYHGLAKGTIRGGVPSSRIATYKVCTPKCSDDNILAAFDDAIADGVDIITISLGNNAAVEFLKDTLAIGSFHAMEKGILTVHAAGNSGPNPSTISSVAPWLLSVAATTIDRQFIDKVILGNGKTFIGNSINIVPSNGTKFPIVECNAQACLGDYKSTKKCSCVDKKVVKGKIVLSDLAGAVLAYENGAIGAIVNFTVDVPHVTHWPSLYLDPKTYALVQSYTNSTKYPKAEILKSDLFQDTTAPEIALFSSRGPNPIVHEIMKPDISAPGVDIFAAYSPNGPSPDDMIVKQNEKYNILSGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVNGSYDLVGEFAYGSGNVNPQQALHPGLIYDITKQDYIQMLCNFGYDDTKIEQISGKKSSCHGASSRSLVKQINYPAMVISVEPHKHFNVKIHRTVTNVGSPNSIYKATIIPIPKIKIRVKPKILSFGTLNEKQSFVVTLVGRAKLHKTVISSSLVWSDGTHNVKSPIYVQRLS* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2040 665 CDD PA_subtilisin_like 271 386 - -
Mal6g2040 665 Pfam Subtilase family 70 497 IPR000209 GO:0006508|GO:0008236
Mal6g2040 665 Gene3D Peptidase S8/S53 domain 71 528 IPR036852 GO:0004252|GO:0006508
Mal6g2040 665 SUPERFAMILY Subtilisin-like 51 515 IPR036852 GO:0004252|GO:0006508
Mal6g2040 665 ProSiteProfiles Serine proteases, subtilase domain profile. 44 515 - -
Mal6g2040 665 Pfam Fibronectin type-III domain 564 661 IPR041469 -
Mal6g2040 665 Pfam Peptidase inhibitor I9 4 47 IPR010259 -
Mal6g2040 665 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 4 663 - -
Mal6g2040 665 ProSitePatterns Serine proteases, subtilase family, serine active site. 454 464 IPR023828 -
Mal6g2040 665 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 48 IPR037045 -
Mal6g2040 665 Gene3D - 532 664 - -
Mal6g2040 665 Gene3D - 264 393 - -
Mal6g2040 665 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 663 IPR045051 -
Mal6g2040 665 CDD Peptidases_S8_3 45 489 IPR034197 -
Mal6g2040 665 PRINTS Subtilisin serine protease family (S8) signature 69 88 IPR015500 -
Mal6g2040 665 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Mal6g2040 665 PRINTS Subtilisin serine protease family (S8) signature 453 469 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2040 Mal-Chr6 46454067 46456736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2040 6 661 Subtilisin-like Serine Gene Family AT3G46850 52.679 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2040 - - mtr:MTR_6g055410 885.174