Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1992 ATGGACCGACCACCGTGGAAGGAAGAAGAAGCGGCGGTTGGCGGTGATGGAGAAAGGGGACCACCACAGCGACCAACTTTAAATCTGCCACCACGTACGGATGCACTTTTCAACGGTGGTTTCAGCCCTGGTCCTATGACTCTTCTCTCTAATTTATTTGCTGATGGTGGTGGTGATGACAAGTCCTTCTCTCAGCTTCTCGCCGGTGCCATGGTGTCTCCGGCAGCGGCACCCGCCGACGGGCTTGATTCATCTGGTTTCTTTTCAAATCCTCAGACTTCCTTTGGAATGACACAGCAGCAACCACTGGCACAGGTCTTGGCTCACGAAGGACAATCCAACACAAATATGCATAACCAAGCAGAACATTTATCATCTGTATCAGCATCCACCGATCACGCTCCTCTCTCTGAACAAAGATTGCAGCCTTCTTCGTTGAATGTCGATAAGCCTGCCGATGATGGCTACAATTGGAGGAAATATGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTATAAGTGCACGCATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCGCTTGCTGGTCATGTAACCGCAATTATTTATAAAGGAGAGCACAATCATGAACGTCTGAATCCTAATAAGCGATCAAAAGACACTATAACTTCAAATGAAAATTCAAATATGCAAGGGAGTGCTGATTCAACTTATCAACGGATGACTTCAAACTCAATGTCTAAGATGGACCCAGAATCTAGTCAGGCAACAGGTGAACATCTATCTGGAATGAGCGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGTAGATGCGGAAGGAGTTGAACCCGACTCAAAAAGGAGAAATACAGAAGTCACAGTCTCCAATCCAATAACTTCACATAGGACTGTCACAGAGGCTAGAATCATCGTGCAAACTACCAGTGAAGTCGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTAGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACACCGGGTTGTAACGTTCGAAAGCATGTAGAGAGGGCTTCGACGGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAATCACAATGTTCCAGCAGCTAAGACTAACAGCCACACTATTGCCAATAATAATGCTTCACAGTTAAAATCGCAAAATACGATTTCTGAGCAGACTAGTTTCGGTAGCATTAGTAATGGCGGGGGCAATGACCAACAACCGGTTGCTCGGCTAAGGCTGAAGGAAGAGCAGATTAACTTGAGCTCCTAA 1314 0.4498 MDRPPWKEEEAAVGGDGERGPPQRPTLNLPPRTDALFNGGFSPGPMTLLSNLFADGGGDDKSFSQLLAGAMVSPAAAPADGLDSSGFFSNPQTSFGMTQQQPLAQVLAHEGQSNTNMHNQAEHLSSVSASTDHAPLSEQRLQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLAGHVTAIIYKGEHNHERLNPNKRSKDTITSNENSNMQGSADSTYQRMTSNSMSKMDPESSQATGEHLSGMSDSEDVGDRETEVDAEGVEPDSKRRNTEVTVSNPITSHRTVTEARIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHNVPAAKTNSHTIANNNASQLKSQNTISEQTSFGSISNGGGNDQQPVARLRLKEEQINLSS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1992 437 SUPERFAMILY WRKY DNA-binding domain 150 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 MobiDBLite consensus disorder prediction 123 146 - -
Mal6g1992 437 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g1992 437 SMART WRKY_cls 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 SMART WRKY_cls 320 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 142 433 IPR044810 GO:0003700
Mal6g1992 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 131 IPR044810 GO:0003700
Mal6g1992 437 MobiDBLite consensus disorder prediction 400 420 - -
Mal6g1992 437 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 142 433 - -
Mal6g1992 437 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 74 131 - -
Mal6g1992 437 MobiDBLite consensus disorder prediction 205 294 - -
Mal6g1992 437 ProSiteProfiles WRKY domain profile. 315 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 MobiDBLite consensus disorder prediction 400 421 - -
Mal6g1992 437 MobiDBLite consensus disorder prediction 1 41 - -
Mal6g1992 437 MobiDBLite consensus disorder prediction 123 157 - -
Mal6g1992 437 MobiDBLite consensus disorder prediction 217 261 - -
Mal6g1992 437 Gene3D WRKY domain 305 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 Gene3D WRKY domain 140 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 Pfam WRKY DNA -binding domain 321 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 SUPERFAMILY WRKY DNA-binding domain 312 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g1992 437 ProSiteProfiles WRKY domain profile. 153 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1992 Mal-Chr6 43168451 43172071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1992 24 433 WRKY Transcription Factor Family AT2G03340 50.864 2.14e-142 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal6g1992 WRKY 1.2e-25 CL0274