Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1972 ATGGAGAGTACAAGATTAGGCCAATGGTTAAAGTTAAACCTTCTAGTGATTGTATTGGTATTGCTGAAGGCAGAAGCTGGTTTTGTTCCAACCACTATTGTCCAAAGTGCTGTAGCAAAAGGAGCCGTTTGTTTGGATGGTAGTCCACCAGCATACAATTTTGATAAGGGATATGGAACAGGAATTAACAGTTGGTTAGTTCATATGGAGGGAGGGGGATGGTGCAACAATGTCACTTCTTGCCTTGCTCGCGCGACCACTCGTTTAGGTTCATCTAAGCAAATGGCTAATACACTTGCATTTTCAGGAATTTTAAATGACAAGAAACAGTTTAATCCAGATTTTTATAATTGGAACAGAATCAAGATTAGATATTGTGATGGTTCATCATTTACCGGTGATGTGGAAGCAGTCAATCCAGTAACTAAGTTGCATTTTAGAGGAGCAAGAATTTTTGAAGCTGTCATGGAGGAATTGCTAGCAAAAGGAATGAAAAATGCTCAAAGTGCTATTCTCTCAGGGTGTTCAGCTGGAGGATTGACCTCATTACTTCATTGTGATCGCTTTCGAGCTCCTTTACCGAGAGGAGCTAAAGTGAAATGCCTCTCAGATGCCGGTTACTTTATCAATGCAAAAGATATTTCTGGAGCACCGGTCATTGAACAGTACTTCAATCAAATTGTTACCACACATGGTTCTGCAAAGAATTTGCCTAGATCATGTACTTCAAAACTAAAACCAGAGCTGTGCTTTTTCCCTCAAAATTTTGTATCACAAATCACTACACCAATCTTCTTTGTAAATTCGCCAATGGACTCCTGGCAGATTAAGCACATTTTGGCGCCAAATGCCGCTGATTGGAATAATTGCAAGCTAGATATAACCAAATGCACTCCTGCTCAACTAAATCAAGTGCAAGGCTTTAGGACAGAATTCCTAAGGGCTTTGGCACCTGTAGGAAACTCTCCGTCGAAAGGAATGTTCATAGACTCATGCTATAACCACTGCCAAACTGAATTGCAAGAATTATGGTTGTTTAATGGCTCTCCATTGTTAGCCAAGACAACCATTGCAAAAGCTGTAGCAGACTGGTTTTATGACAGAAGACCTTTCCATCAGATAGACTGTCCTTACCCTTGCAATCCAACTTGTCACAACGGCCTTTCAGAAGACCATCCAGAATTATAG 1188 0.4057 MESTRLGQWLKLNLLVIVLVLLKAEAGFVPTTIVQSAVAKGAVCLDGSPPAYNFDKGYGTGINSWLVHMEGGGWCNNVTSCLARATTRLGSSKQMANTLAFSGILNDKKQFNPDFYNWNRIKIRYCDGSSFTGDVEAVNPVTKLHFRGARIFEAVMEELLAKGMKNAQSAILSGCSAGGLTSLLHCDRFRAPLPRGAKVKCLSDAGYFINAKDISGAPVIEQYFNQIVTTHGSAKNLPRSCTSKLKPELCFFPQNFVSQITTPIFFVNSPMDSWQIKHILAPNAADWNNCKLDITKCTPAQLNQVQGFRTEFLRALAPVGNSPSKGMFIDSCYNHCQTELQELWLFNGSPLLAKTTIAKAVADWFYDRRPFHQIDCPYPCNPTCHNGLSEDHPEL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1972 395 PANTHER NOTUM-RELATED 3 389 IPR004963 GO:0016787
Mal6g1972 395 Pfam Pectinacetylesterase 23 369 IPR004963 GO:0016787
Mal6g1972 395 PANTHER PECTIN ACETYLESTERASE 3 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1972 Mal-Chr6 42688413 42691977 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1972 5 386 Carbohydrate Esterase AT4G19420 60.333 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1972 K19882 - gmx:100776478 629.402