Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1939 ATGTGTAGTCTAGAATTCAATGCTTTGATCAGGGTTTGTGTTTTGTTGGCTTTTGCATCTGTGATTTCTTCTCTGGAACCTCAACTTGGATCAACCCGCGTCGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTATCCAACTGTTGCACCCAAAACTGTTGACCACATTTTCAAGCTTGTGAGACTTGGAGGCTATAACACCAATCATTTCTTTCGGGTGGATAAGGGATTTGTTGCCCAAGTAGCTGATGTTGCAAATGGAAGATCGGCTCCCATGAATGAGGAACAAAGAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGTGATGTCAAACATGTTAGGGGTATTCTTTCCATGGGAAGGCATGACGATCCAGACAGTGGTGGATCCTCTTTTTCAATGTTACTTGGAAATTCTCCTCATCTTGATGGGAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGATGATACATTGACAAAGCTTGAGCAACTACCTACCCGTAGAGAGGGAATATTTGTCATGGGGCAGAAATGGAGAGACTGA 558 0.4122 MCSLEFNALIRVCVLLAFASVISSLEPQLGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSDVKHVRGILSMGRHDDPDSGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRREGIFVMGQKWRD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1939 185 CDD cyclophilin 35 175 - -
Mal6g1939 185 Gene3D - 21 180 IPR029000 -
Mal6g1939 185 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 173 IPR002130 GO:0000413|GO:0003755
Mal6g1939 185 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 11 181 - -
Mal6g1939 185 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 11 181 IPR044233 -
Mal6g1939 185 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Mal6g1939 185 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Mal6g1939 185 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Mal6g1939 185 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Mal6g1939 185 SUPERFAMILY Cyclophilin-like 25 178 IPR029000 -
Mal6g1939 185 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 185 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1939 34 170 U-box Gene Family AT5G67530 28.966 2.71e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1939 - - gmx:100819238 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1939 6 41953683 41956178 Mal6g1939 6 41953683 41956178 ECH