Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1938 ATGGAATTTGACTCTCTTGAAGATGTTAAAAATTTATACACATCATTTGCTAAAAAAGAAGGTTATGGAATTCGTACACGTTCAACTAAGACAAATTTGTGCATATTTGTTTGCTCTAATGCTGGTCAACATGTTGTTAATAGTAACGACAATGAAGAAAGCAATACATTCACAGAAATAGGTAAAAAAAGATGTTCAACATCAAGAACTGATTGTAAGGCAACACTTGTTGTTTCAAAAGCAAAAATGAGACCCAAGTGGACTATAATTACATTTAACAATGCCCATAACCATGCAATGGTTAGCCCTAAGAGTATAAACTATCTTAGGTGCCATAAAAAAATGGGCGGGGCAACAAAGAATCTAGTTGAACAGTTTGATCAAGAGGGCTTGCCTACCGGAAAAGTCGCTACAATGTTTAGCAATGAAGGTGCAACTTTCTCTGATAGAGATTGTTGGAATCATCTTAGAGATCTCAGATTGAAAAATTTGGACGTTGGAGATGCTCAACCAGTGTTTAACTTTTGTAAGCAAAAACAAGCAGAGAACCCAAATTTCTTTTATGCAATACAAGTTGATAATGATGCCAGAATGATTGTTTTTTTTTGGGTTGATGCAAGTTTGAGGTTGGCCTACAATTATTTTGGAGATGTTGTTACATTTGATACAACTTATAAGACCAACAAGTATAGTATGCCATTTGCGCCTTTTACTGGATTGAATCATCATCATCAGTCCATTTTACTCGGTTGTGCTTGGTTGCAAGATGAAACAGAGAAGTCTTTTACATGGTTGTTTGAAACTTGGCTAATGGCAATGAGTGGAAAGAGTCCTGTATCAATAATTACAGATCAAGATTGGGTAATGGGTGCTGCAATATCTAAGGTATTTCCAAATACTCGGCATCGTTTATGTTTGTGGCACATTAGAAAAAAGTTTCCTGAGAAGCTTGGACACATATACCATAAAAGATCAAATTTCAAGCGTCAACTTAAAAGGTGTATACGTGATTCATTATGCATTAAAGATTTTGAGGAAGATTGGCACCAAATAATGGTTAAATATGATTTGGGAAAAAATGAATGGCTCCAAGGTTTGTATGATATTAGAGAGTCATGGATTCCTATTTATAATAGGAAGACCTTTTTTGCTGGGATGAATACAACACAAAGGAGTGAGAGCATATATGCATTTTTTGATTCTTTTGTTGATTCTTCAACCACACTGCGAGATTTCGTAGTAAAGTATGACAAAGCAGTGGATAGTCGCTGTGAGAAAGAAAAAAAAGAAGATTTTGAATCGCGACATCGAGCACGCCTCTTAAGTGTTGGATCTAAAATTGAAAAGCAGGTAGCAACTATTTATACTAGAAACATCTTTATGAAGTTTCAGGACGAGCTTGCAAAGGTTAGCCACTTCATCAAGGAAAAAATTGAGAAAAATGGGGTTGCTAAATGTGGTTGTCAACTTTTTGAATTTATGGGGATATTATGCAGGCACATCTTGATGGTTTTTCAATCAAAAAATATTGTTGAAATTCCAAATGAATATATTTTAAAGCGTTGGACAAAGGATGCTAATATTGGCATTATATCTGGTGTTAATGAAAACAATTCAGTATGTGAGAGTACTAAATCAGCAACCCTTCAAAGTATGCATGTGCTTAGTCAAGCAAGTTTATTATCTGATCTTGCAAAATCTGAGAATATATATGAGTTTATATCTCCGGAGCTTGAAAAGATCATCAAAAAGGCCAGAATGATGGACTCCGAAAGACAAATTATAGTTTCAGAAACAAGGTTTGAAGATGAGATCATGTGTGAGCAAGCAACCGAAGAACCTGATATCATTAGAGATCCGATTATGGCACAAACTAAAGGAAGACAGAAGGATAGTGTAAGAGTTTCTCAACCTGGAAGAATCAAAAGCAGTCTGGAGTTATCAATGAATTGTGTCTCAGCAAAAAGAAGGTGTCAAATATGTGGAGTACATGGTCATAATCGATGA 2007 0.3523 MEFDSLEDVKNLYTSFAKKEGYGIRTRSTKTNLCIFVCSNAGQHVVNSNDNEESNTFTEIGKKRCSTSRTDCKATLVVSKAKMRPKWTIITFNNAHNHAMVSPKSINYLRCHKKMGGATKNLVEQFDQEGLPTGKVATMFSNEGATFSDRDCWNHLRDLRLKNLDVGDAQPVFNFCKQKQAENPNFFYAIQVDNDARMIVFFWVDASLRLAYNYFGDVVTFDTTYKTNKYSMPFAPFTGLNHHHQSILLGCAWLQDETEKSFTWLFETWLMAMSGKSPVSIITDQDWVMGAAISKVFPNTRHRLCLWHIRKKFPEKLGHIYHKRSNFKRQLKRCIRDSLCIKDFEEDWHQIMVKYDLGKNEWLQGLYDIRESWIPIYNRKTFFAGMNTTQRSESIYAFFDSFVDSSTTLRDFVVKYDKAVDSRCEKEKKEDFESRHRARLLSVGSKIEKQVATIYTRNIFMKFQDELAKVSHFIKEKIEKNGVAKCGCQLFEFMGILCRHILMVFQSKNIVEIPNEYILKRWTKDANIGIISGVNENNSVCESTKSATLQSMHVLSQASLLSDLAKSENIYEFISPELEKIIKKARMMDSERQIIVSETRFEDEIMCEQATEEPDIIRDPIMAQTKGRQKDSVRVSQPGRIKSSLELSMNCVSAKRRCQICGVHGHNR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1938 668 Pfam MULE transposase domain 218 312 IPR018289 -
Mal6g1938 668 Pfam SWIM zinc finger 481 509 IPR007527 GO:0008270
Mal6g1938 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 484 605 IPR031052 GO:0006355
Mal6g1938 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 482 IPR031052 GO:0006355
Mal6g1938 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 484 605 - -
Mal6g1938 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 1 482 - -
Mal6g1938 668 ProSiteProfiles Zinc finger SWIM-type profile. 472 509 IPR007527 GO:0008270
Mal6g1938 668 SMART 26again6 484 511 IPR006564 GO:0008270
Mal6g1938 668 Pfam FAR1 DNA-binding domain 12 101 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1938 Mal-Chr6 41927821 41929905 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g1938 MULE 8.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1938 - - qlo:115970754 773.467