Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1926 ATGGATCCGCATGAACCACCACACTCTCCTCACTCTCATCACCTTCAACTTGAAAATATCAGGTTGGTGGGGCAAAATCCATTCACAACCACCGTCTCGACCACCATGATGGCACCAACCTCTGCTCGACTCCCTTTGTTTAGCATCAACGATAACTCTTCCCCTCATTCGGAGCCTCATGTCAACAATAACATGGTTCCTTCCATCTTGAATCCATGCGTAGGTGCTTCCTCTGGAACTAGCTCAATGAAGAGAAAGAGGGGTCGGCCCAGGAAGTACTTTCCTGGTGTCAACACTTATTCAGGCTTGGGATCTATCTCAGGTCCAACACAGGCTCCAACTGTTTTCTCTCCTTCTTCTTCCACCGACAATAAGAATACTAATGGAAGGGGAAGACCTCATGACTCTTTTAAGATGCAGCCGGTTGAAATACTTGGAGTTATTGGATCAGGTTTCTCTCCACATGTTATCTTTGTGAATCAAGGAGAGGACATTATAGAAAAAGTTACAGCCTTTAGTCAGGAAGTAGCAGGACCTAATACAGAGATATGTATTATGTCTGCTCATGGTTTGGTTGGCATTGTTGCCCTTCACCAATCTGGGAGCATTGTTAATTACGAGGGACAATTTGAAATTGTATCCTTGTCAGGAAATTTAGAAGTATCTGACAACAAGAATGGCAGTATCAAAAAGAGTTACTTCAAGGTGTGTTTAGTAGGTCACGATTCACGCCCTTTGGTAGGTGTGGTTGCTAATATGCTTATTGCAGCCTCATTAGTAAAGGTCACAGTGGGTAGCTTTACTATGGATAGCAAAAAGGCTAGCTCGGATAACCTGAAATATGAGCTTTCTTCAGTGCCATCGTCCCAGTTTGCTGCTTATGGGACTCCAACCAATGCGACCTCTCTAGGGCCTTCGTCTGAGACCTTAGGTGACAATGAGAATAATCATTTTAGTCAGGGGCCTGAAATCTACAATAATACCAATCAACCCATTCCTAGTATCTCAATGTACCAACAATTGTGGGCTCACCAAACTCAGAAGTGA 1047 0.4384 MDPHEPPHSPHSHHLQLENIRLVGQNPFTTTVSTTMMAPTSARLPLFSINDNSSPHSEPHVNNNMVPSILNPCVGASSGTSSMKRKRGRPRKYFPGVNTYSGLGSISGPTQAPTVFSPSSSTDNKNTNGRGRPHDSFKMQPVEILGVIGSGFSPHVIFVNQGEDIIEKVTAFSQEVAGPNTEICIMSAHGLVGIVALHQSGSIVNYEGQFEIVSLSGNLEVSDNKNGSIKKSYFKVCLVGHDSRPLVGVVANMLIAASLVKVTVGSFTMDSKKASSDNLKYELSSVPSSQFAAYGTPTNATSLGPSSETLGDNENNHFSQGPEIYNNTNQPIPSISMYQQLWAHQTQK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1926 348 ProSiteProfiles PPC domain profile profile. 149 289 IPR005175 -
Mal6g1926 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 57 347 - -
Mal6g1926 348 MobiDBLite consensus disorder prediction 104 136 - -
Mal6g1926 348 Gene3D - 154 287 - -
Mal6g1926 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 57 347 IPR039605 GO:0003680
Mal6g1926 348 MobiDBLite consensus disorder prediction 104 127 - -
Mal6g1926 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 268 - -
Mal6g1926 348 CDD DUF296 154 267 IPR005175 -
Mal6g1926 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 268 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1926 Mal-Chr6 41353409 41357526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1926 78 273 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 41.584 1.16e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1926 - - mtr:MTR_5g014360 328.946