Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1924 ATGGATCCGCATGAACCATCACACTCACCTCACTCTCACCACCTTCAACTTGAAAATACCAGGATGGTGGGGCCAAATCCATTCACAAACACCATCTCTACCACCCTGATGGCACCAACCACTTCTCGACTCCCTTTGTTCAGCACCAACAATAACTTTTCCCCTCGTTCAGAGCCTCATGTCAACAATAACATGGTTCCCTCCATCTTGAATCCATGCGTAGGGGCTTCCTCTGGAACTGGCTCAATCAGGAGAAAGAGGGGTCGGCCCAGGAAGTACTTTCCTGGTGTCAACACTTCTTCAGGCTTGGGATCTATCTCAGGTCCAACACAGGCTCCAACTGTTACCTCTCCTTCTTCTTCCACCGGCCATAAGAATACTAGTGGAAGGGGAAGGGGAAGGGGAAGGCCCCGTGGCTCTTTTAAGAAGACGCAGGCAGTTGAAATGATTGGAGTTTTTGGATCTGGTTTCTCTCCACATGTTATCTTTGTGAATCAAGGAGAGGTATGCAATAAAACCTATATTTCCAACATTAACTTGTTATATTGCACTAATTTTCACAATTTTTAA 570 0.4614 MDPHEPSHSPHSHHLQLENTRMVGPNPFTNTISTTLMAPTTSRLPLFSTNNNFSPRSEPHVNNNMVPSILNPCVGASSGTGSIRRKRGRPRKYFPGVNTSSGLGSISGPTQAPTVTSPSSSTGHKNTSGRGRGRGRPRGSFKKTQAVEMIGVFGSGFSPHVIFVNQGEVCNKTYISNINLLYCTNFHNF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1924 189 SMART AT_hook_2 84 96 IPR017956 GO:0003677
Mal6g1924 189 SMART AT_hook_2 131 143 IPR017956 GO:0003677
Mal6g1924 189 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g1924 189 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g1924 189 MobiDBLite consensus disorder prediction 98 128 - -
Mal6g1924 189 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 63 168 IPR039605 GO:0003680
Mal6g1924 189 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 63 168 - -
Mal6g1924 189 MobiDBLite consensus disorder prediction 74 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1924 Mal-Chr6 41054553 41055217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1924 75 176 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 38.679 6.32e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1924 - - mtr:MTR_5g014360 131.724