Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1918 ATGGATCCGCATGAACCACCACACTCACCTCACTCTCACCACCTTCAACTTGAAAATATCAGGTTGGTGGGGCCAAATCTATTCACAAACACCATCTCGACCACCCTGATGGCACCAACCACTTCTCGACTCCCTTTGTTCAGGATCAACGATAACTCTTCCCCTCATTCAGAGCCTCATGTCAACAATAACATGGTTTCTTCCATCTTGAATCCATGTGTAGGTGCTTCCTCTGGAACTGGCTCAATCAAGAGAAAGAGGGGTCGGCCGAGGAAGTACTTTACTGGTGTCAATACTTCTTCGGGCTTGAGATCTATCTCAGGTCCAACACAGGCTCCAACTGTTACCTCTCCTTCTTTTTCCACCGGCCATAAGAATACTAGTGGAAGGGGAAGGCCCCGTGCCTCTTTTAAGAAGAAGCAGCCAGTTGAAACGATTGGAGTTTTTGGATCTGGTTTCTCTCCACATGTTATCTTTGTGAATCAAGGAGAGGAAGTAGCAGGACCTAATACAGAGATATGTATTATGTCTGCTCATGGTTTGGTTGGCAGTGTTGCCCTTCACCAATCTGGGAGCATTGTTAATTACGAGGGACAATTTGAAATTGTATCCTTGTCAGGAAATTTAGAAGTATACGACAACAACAGTGGCAGTAGCAAAATGAGTTACTTCAAGGTGTGTTTAGTAAGCTCTGATTCACGCCTTTTGGTAGGTGTGGTTGCTGATACGCTTATAGCAGCATCATCAGTAAAGATCACAGTGGGTAGCTTTACTTTGGATGGGAAAAAGGTTAGCTCGAATAACCTAAAATATGAACCTTCTTTAGTGACACTGTCTCAGTTTGCTGCTTTTGGGACTCCAACCGAAGCGACCTCTCAAGGGCCTTCATTTGATTCCTTAGGTGACAATGAGAATAATCATTTTAGTCAGGAGCCTGAAATTAACAATAATACCAATCAGCCAATGCCTACTATCTCGATATACCAACAACTTTGGGCTCACCAAAATCAGAAGTGA 1017 0.4385 MDPHEPPHSPHSHHLQLENIRLVGPNLFTNTISTTLMAPTTSRLPLFRINDNSSPHSEPHVNNNMVSSILNPCVGASSGTGSIKRKRGRPRKYFTGVNTSSGLRSISGPTQAPTVTSPSFSTGHKNTSGRGRPRASFKKKQPVETIGVFGSGFSPHVIFVNQGEEVAGPNTEICIMSAHGLVGSVALHQSGSIVNYEGQFEIVSLSGNLEVYDNNSGSSKMSYFKVCLVSSDSRLLVGVVADTLIAASSVKITVGSFTLDGKKVSSNNLKYEPSLVTLSQFAAFGTPTEATSQGPSFDSLGDNENNHFSQEPEINNNTNQPMPTISIYQQLWAHQNQK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1918 338 CDD DUF296 155 257 IPR005175 -
Mal6g1918 338 MobiDBLite consensus disorder prediction 95 129 - -
Mal6g1918 338 MobiDBLite consensus disorder prediction 95 140 - -
Mal6g1918 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 59 337 - -
Mal6g1918 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 171 258 IPR005175 -
Mal6g1918 338 Gene3D - 164 272 - -
Mal6g1918 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 59 337 IPR039605 GO:0003680
Mal6g1918 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1918 Mal-Chr6 40745870 40749139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1918 75 263 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 42.927 3.92e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1918 - - mtr:MTR_5g014360 323.553