Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1915 ATGGATCCACATGAACCACCACACTCACCTCACTCTCACCATCATCAACTTGAAAATATCAGGTTGGTGGGGCCAAATCCATTCACAAACACCATCTCGACCACCCTGATGGCACCAACGACTTCTCGACACCCTTTGTTCAGGATCAACGATAACTCTTCCCCTCATTCAAAGCCTCATGTCAACAATAACATGAACATTATATCAAAAGTTACAGCCTTTGGTCAGGAAGTAGCAGGACCTAATACAGAGATATGTATTATGTCTGCTCATGGTTTGGTTGGCAGTGTTGCCCTTCACCAATTTGGGAGCATTTCTAATTACGAGGGACAGTTTGAAATTGTATCCTTGTCAGGAAATTTAGAAGTATATGACAACAACAGTGGCAGTAGCAAAATGAGTTACTTCAAGGTGTGTTTAGTAAGCCCTGATTCACGCCTTTTGGTAGGTGTGGTTGCTGATACGCTTATAGCAACATCATCAGTAAAGGTCACAATGGGTAGCTTTACTTTGGATGGCAAAAAGGCTAGCTCGAATAACCTAAAATATGAACCTTCTTTAGTGACACAGTCCCAGTTTGCTGCTTTTGGGACTCCAACCGAAGCGACCTCTCAAGGGCCTTCATTTGATTCCTTAGGTGACAATGAGAATAATCATTTTAGTCAGGAGCCTGAAATCAACAATAATACTAATCAGCCAATTCCTACTATGTCGATGTACCAACAACTGTGGACTCACCAAAATCAGAAGTGA 753 0.421 MDPHEPPHSPHSHHHQLENIRLVGPNPFTNTISTTLMAPTTSRHPLFRINDNSSPHSKPHVNNNMNIISKVTAFGQEVAGPNTEICIMSAHGLVGSVALHQFGSISNYEGQFEIVSLSGNLEVYDNNSGSSKMSYFKVCLVSPDSRLLVGVVADTLIATSSVKVTMGSFTLDGKKASSNNLKYEPSLVTQSQFAAFGTPTEATSQGPSFDSLGDNENNHFSQEPEINNNTNQPIPTMSMYQQLWTHQNQK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1915 250 CDD DUF296 67 169 IPR005175 -
Mal6g1915 250 Gene3D - 60 188 - -
Mal6g1915 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 170 IPR005175 -
Mal6g1915 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 60 249 IPR039605 GO:0003680
Mal6g1915 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 170 - -
Mal6g1915 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 60 249 - -
Mal6g1915 250 ProSiteProfiles PPC domain profile profile. 51 190 IPR005175 -
Mal6g1915 250 MobiDBLite consensus disorder prediction 199 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1915 Mal-Chr6 40689415 40692556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1915 13 169 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 33.750 4.27e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1915 - - mtr:MTR_3g023560 286.189