Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1912 ATGGATCCGCATGAACCACCACACTCACCTCACTCTCACCACCTTCAACTTGAAAATATCAGGTTGGTGGGACCAAATCCATTCACAAACACCATCTCGACCACCCTGATGGCACCAACCACTTCTCGACACCCTTTGTTCAGGATCAACGATAACTCTTCCCCTCATTCAGAGCCTCATGTCAACAATAACATGGTTCCTTCCATCTTGAATCCATGTGTAGGTGCTTCTTCTGGAATTGGCTCAATCAAGAGAAAGAGGGGTCGGCCCAGGAAGTACTTTACTGGTGTCAACACTTCTTCGGGCTTGGGATATATCTCAGGTCCAACACAGGCTCCAACTGTTAACTCTCCTTCTTTTTCAACCGGCCATAAGAATACTAGTGGAAGGGGAAGGCCTCGTGCTTCTTTTAAGAAGAAGCAGCCAGTTGAAATGATTGGAGTTTTTGGATCTGGTTTCAGTCCACATGTTATCTTTGTAAATCAAGGAGAGAACATTATATCCAAAGTTACAGCCTTTGGTCTGGAAGTAGCAGGACCTAATACAGAGATATGTATTATGTCTGCTCATGGTTTGGTTGGCAGTGTTGCCCTTCACCAATTTGGGAGCATTGCTAATTACGAGGGACAATTTGAAATTGTATCCTTGTCAGGAAATCTAGAAGTATATGACAACAACAGTGGCAGTAGCAAAATGAGTTACTTCAAGGTGTGTTTAGTAAGCCCTGATTCACGCCTTTTGGTAGGTGTGGTTGCTGATACGCTTATAGCAACATCATCAGTAAAGGTCACAGTGGGTAGCTTTAATTTGGATGGCAAAAATGCTAGCTCGAATAACCTAAAATATGAACCTTCTTTAGTGACACTGTCCCAGTTTGCTGCTTTTGGGACTCCAACCGAAGCGACCTCTCAAGGGCCTTCATTTGATTCCTTAGGTGACAATGAGAATAATCATTTTAGTCAGGAGCCTGAAATCAACAATAATACCAATCAGCCAATTCCTACTATGTCGATGTACCAGCAACTGTGGACTCACCAAAATCTGAAGTGA 1050 0.4333 MDPHEPPHSPHSHHLQLENIRLVGPNPFTNTISTTLMAPTTSRHPLFRINDNSSPHSEPHVNNNMVPSILNPCVGASSGIGSIKRKRGRPRKYFTGVNTSSGLGYISGPTQAPTVNSPSFSTGHKNTSGRGRPRASFKKKQPVEMIGVFGSGFSPHVIFVNQGENIISKVTAFGLEVAGPNTEICIMSAHGLVGSVALHQFGSIANYEGQFEIVSLSGNLEVYDNNSGSSKMSYFKVCLVSPDSRLLVGVVADTLIATSSVKVTVGSFNLDGKNASSNNLKYEPSLVTLSQFAAFGTPTEATSQGPSFDSLGDNENNHFSQEPEINNNTNQPIPTMSMYQQLWTHQNLK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1912 349 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 269 IPR005175 -
Mal6g1912 349 CDD DUF296 155 268 IPR005175 -
Mal6g1912 349 MobiDBLite consensus disorder prediction 105 129 - -
Mal6g1912 349 ProSiteProfiles PPC domain profile profile. 149 289 IPR005175 -
Mal6g1912 349 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 269 - -
Mal6g1912 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 58 347 IPR039605 GO:0003680
Mal6g1912 349 Gene3D - 155 283 - -
Mal6g1912 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 58 347 - -
Mal6g1912 349 MobiDBLite consensus disorder prediction 105 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1912 Mal-Chr6 40561908 40564859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1912 75 274 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 42.029 1.66e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1912 - - mtr:MTR_5g014360 331.643