Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1909 ATGGATCCGCATGAACCACCACACTCACCTCACTCTCACCACCTTCAACTTGAAAATATCAGGTTGGTGGGGTCAAATCCATTCACAAACACCATCTTGACCACTCTGATGGCACCAACCACTTCTCGACACCCTTTGTTCAAGATCAACGATAACTCTTCCCCTCATTCAGAGCCTCATGTCAACAATAACATGATATGTATTATGTCTGCTCATGATTTAGTTGGCAGTGTTTCCCTTCACCAATTTGGGAGCATTGTTAATTACGAGGGACAATTTGAAATTGTATCCTTGTCAGGAAATCTAGAAGTATATGACAACAACAGTGGCAGTAGCAAAATGAGTTACTTCAAGGTGTGTTTAGTAAGCCCTGATTCACGCCTTTTGGTAGGTGTGGTTGCTGATACGCTTATAGCAACATCATCAGTAAAGGTCACAGTGGGTAGCTTTACTTTGGATGGAAAAAAGGCTATCTCGAATAACCTAAAATATGAACCTTCTTTAGTGACACAGTCTCAGTTTGCTGCTTTTGGGACTCCAACCGAAGCGACCTCTCAAGGGCCTTCATTTGATTCCTTAGGTGACAATGAGAATAATCATTTTAGTCAGGAGCCTAAAATCAACAATAATACCAATCAGCCAATTCCTACTATGTCGATGTACCAGGAACTGTGGGCTCACCAAAATCAGAAGTGA 696 0.4181 MDPHEPPHSPHSHHLQLENIRLVGSNPFTNTILTTLMAPTTSRHPLFKINDNSSPHSEPHVNNNMICIMSAHDLVGSVSLHQFGSIVNYEGQFEIVSLSGNLEVYDNNSGSSKMSYFKVCLVSPDSRLLVGVVADTLIATSSVKVTVGSFTLDGKKAISNNLKYEPSLVTQSQFAAFGTPTEATSQGPSFDSLGDNENNHFSQEPKINNNTNQPIPTMSMYQELWAHQNQK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1909 231 Gene3D - 61 171 - -
Mal6g1909 231 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 64 230 - -
Mal6g1909 231 CDD DUF296 66 150 IPR005175 -
Mal6g1909 231 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 151 IPR005175 -
Mal6g1909 231 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 64 230 IPR039605 GO:0003680
Mal6g1909 231 SUPERFAMILY AF0104/ALDC/Ptd012-like 64 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1909 Mal-Chr6 40519283 40522446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1909 5 156 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 36.774 1.61e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1909 - - mtr:MTR_3g023560 247.284