Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1907 ATGGGGAAAGGAAGAAGTCCGGGGAAATGGATCAGGAACTTATTCTCAGGGGGGAAGAAATCGTCATCGAAGTCTAGTTTGTCAAAGAAGAATGATATTTTTAAATCTTCGAGCAACAAGGATCCGCTTGGATCTTCTGAGTTAACTGTGTCTAATCCAATTTCAACTGTGGATTCTTTGCAAATATCCGCACCAATATCTGGAGCTAATGTTGCTAAAGGAGTGGTTTCAGAGAAGGAAGTAGTTAGTAAGTCATCACATGAGAGGGATATTCTCTCAAACGGAGATGTAGAGGCTTGTGCACCAGCCGTTGCTAATTTTGTACCTCAAGAGAATGCTGAGACACTCAAGCTTACAGAAGCAGCTATTAAACTTCAGGCTGTTTGTAGAGGCTATAAGGCTCGTCGGGAATTTCAAACTCTCAAAGCTATCACACAGCTGCAAGCTCTTATTCGGGGTCACTTGGTTAGAAGACAAGCTGTTTCTTCTTTATATTGTGTGGAGGGAATTGTTAAATTCCAAGCAGTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTTGAGGTCCTGAAAATTCGCAAGGATACTCAATGTTCAAAATCCATTGGCGTTATTACATCTACACCGGCAGAGAAGCTGTCAGAAAATGTCTTTGTTCGCCAGCTGCTGGCTTCATCGACCCGCACGTTTCCTCTTTCTCTAAATAGTGATCTTGGAGAACCTTACTTGGCTTCGAAGTGGCTTAAACGCTGGACAAGGTCAAGCTTTTGGGCACCTCTTCCTAAATTGAAGAAGAAACATGACTCGGTGTCGGATGAAAAGAATATCAGTTGCCAAACAGTTGAAAAGGGTCAAGTTAAAAGGACTACCCGGAAATCTCCTGCTGTGAAAGCTAATGATGGCTCAAGTTCAAGTTCTAACAAACAAAAACAGCGTCCAAAAACGGATTCCAATCACTCATTGGTTTCAGCTCAGGCACAAGAACGCCCAAAGAAAGAAATTGAGAAAAGTAGTCTAAAGAAAACTCGCATGCAGAATGCTTCAGACAGATCTGACAGTCTTAATGAGAAAAGAAAAAACAGCTCTAGGTCAACTTCAGATCAAACTGTTACTGATGTTTCAGAGCAGGGGCCAAATTCCTTTTCTGAGAAAACGAAAGAAACGACGGGGCCAATGTCAGAAGAGTCTTATCCTGAGAAAGGTCTTGCACAGAAAGCACTAGAAGAGAATAATGATAAGCCAAAGAAGACCTTAAATGGTGGTGCCAAAGAAGAGAAAGGAAAGAAAACACTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGCCAAAGAAGAGAAAAATCTTGGACTGAAAACACTACAAGAGAATAACGATAAGCCAAAGAAGGGCTTAAATGGCGTTGTCAAAGAAGAGAAAGATCTTGGACAGAAAACACAAGAAGAGAGTAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCACCAGAAGAAAATAATGATAACCTTAAGAAGAGCTTAAATGGCGGTGCCAAAGAAGAGAACGGTCATAATGATCCTACTGTTGTCTTAGAGACTAGTGTGACGAAGGTAGGAGATGAAAAAATAGGAGTTAGTGAAGACTTAAATGGCGGCGACAAAGTTATCAGCAACAATTACCAACGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGAAAATGAGATACATAACACTCCAACTCCAAGAGTTCCGAGTTATATGGCTCCAACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATTTCTTAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCTTCTTCACTTAACAGCAAGTCAGGTTCATTTTCTCCAAGAGCAGAAAAGCTGATAACTTTGAGCGGGAGAGGAGTTGCGAGGACTGATAAATCTTTGTCATCTTCAAGGGATGGAACTGATAAGTTGACACAACCTCAGTGGAGAAGGTGA 2046 0.415 MGKGRSPGKWIRNLFSGGKKSSSKSSLSKKNDIFKSSSNKDPLGSSELTVSNPISTVDSLQISAPISGANVAKGVVSEKEVVSKSSHERDILSNGDVEACAPAVANFVPQENAETLKLTEAAIKLQAVCRGYKARREFQTLKAITQLQALIRGHLVRRQAVSSLYCVEGIVKFQAVARGYNVRRSDIGLEVLKIRKDTQCSKSIGVITSTPAEKLSENVFVRQLLASSTRTFPLSLNSDLGEPYLASKWLKRWTRSSFWAPLPKLKKKHDSVSDEKNISCQTVEKGQVKRTTRKSPAVKANDGSSSSSNKQKQRPKTDSNHSLVSAQAQERPKKEIEKSSLKKTRMQNASDRSDSLNEKRKNSSRSTSDQTVTDVSEQGPNSFSEKTKETTGPMSEESYPEKGLAQKALEENNDKPKKTLNGGAKEEKGKKTLEENNDKPKKSLNGGAKEEKNLGLKTLQENNDKPKKGLNGVVKEEKDLGQKTQEESNDKPKKSLNGGAKEEKGLGQKAPEENNDNLKKSLNGGAKEENGHNDPTVVLETSVTKVGDEKIGVSEDLNGGDKVISNNYQRRASLPANFNDQENEIHNTPTPRVPSYMAPTESAKARLRGQGSPRFATDFLDKNSLTRRHSLSSSLNSKSGSFSPRAEKLITLSGRGVARTDKSLSSSRDGTDKLTQPQWRR* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1907 681 MobiDBLite consensus disorder prediction 16 47 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 658 681 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 626 646 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 1 47 - -
Mal6g1907 681 Gene3D - 115 165 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 297 327 - -
Mal6g1907 681 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Mal6g1907 681 SMART iq_5 117 139 IPR000048 GO:0005515
Mal6g1907 681 SMART iq_5 140 161 IPR000048 GO:0005515
Mal6g1907 681 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Mal6g1907 681 Pfam IQ calmodulin-binding motif 119 139 IPR000048 GO:0005515
Mal6g1907 681 Pfam IQ calmodulin-binding motif 170 184 IPR000048 GO:0005515
Mal6g1907 681 MobiDBLite consensus disorder prediction 328 365 - -
Mal6g1907 681 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Mal6g1907 681 MobiDBLite consensus disorder prediction 575 595 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 575 681 - -
Mal6g1907 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 160 IPR027417 -
Mal6g1907 681 PANTHER IQ-DOMAIN 5-RELATED 1 678 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 366 389 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 270 543 - -
Mal6g1907 681 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 678 - -
Mal6g1907 681 MobiDBLite consensus disorder prediction 403 527 - -
Mal6g1907 681 Pfam Protein of unknown function (DUF4005) 580 654 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1907 Mal-Chr6 40364372 40370217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1907 569 681 IQD Protein Family AT1G14380 46.087 2.73e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1907 - - mtr:MTR_5g038620 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1907 6 40364372 40370217 Mal6g1907 6 40364372 40370217 ECH
Mal6g1907 6 40364372 40370217 Mal5g4224 5 113109621 113114410 ECH