Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1903 ATGAAGATGATGTTGCAGGCACTGTCCTATACAACGACTACTAACCCATTCTCATTCCCAACTCACTCTCTCATCACTCCCAAAAAATCAATTCCTTTACGACATCGTGTGGGTCCCACTTTCTCCTCCACTCTCCCACAATTCACTCTCACATGTCGCCACTCAGAGCTTTTCCAACCCAAACCATTCCCTCCATCACCACCTCAACGCCCTCAACCTTTTTATTCTTCCTCAGTGGTAGAATTACCAGCAAGGGTTTATGTTGGTCATTCAGTTTACAAAGGGAAAGCTGTACTCACTGTGTCTCCTAGACCTCCAGAATTCACTTCATTGGATTCTGGGGCATTCAAGATATCTAGAGAAGGTTGTGTGCTGTTACAGTTTGCTCCTTCTGCTGGTGTGCGACAATATGATTGGAACAGAAAGCAGGTATTTTCACTATCAGTGGGTGAAATGGGAAATCTAATTAGTCTTGGTGCAAGGGAATCTTGTGAATTTTTTCATAATCCTTTTATTGGAAAAAGTGATGAAGTAAAAGTGAGCAAAGTTTTGAAGGTGGAGCCACTTCACGACGGTTCCGGTCACATGTTTAACCTAAGTGTTCAAAACAAGCTCGAGAACATCAACGAAAACATATTTATCCCTATCACGAAAGCCGAGTTTGCAGTTTTCAATTCACTTTTCAATTTTATCATGCCATGCCTCTTAGGTTGGAATGCCTTTGCGGACTCCATAAAGCCAGAAGTAAATATTGCAAACCGAAGAAAAGAAGAAGACTTTGAATGGAACAGATAG 795 0.4176 MKMMLQALSYTTTTNPFSFPTHSLITPKKSIPLRHRVGPTFSSTLPQFTLTCRHSELFQPKPFPPSPPQRPQPFYSSSVVELPARVYVGHSVYKGKAVLTVSPRPPEFTSLDSGAFKISREGCVLLQFAPSAGVRQYDWNRKQVFSLSVGEMGNLISLGARESCEFFHNPFIGKSDEVKVSKVLKVEPLHDGSGHMFNLSVQNKLENINENIFIPITKAEFAVFNSLFNFIMPCLLGWNAFADSIKPEVNIANRRKEEDFEWNR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1903 264 Gene3D Transcriptional Coactivator Pc4; Chain A 80 257 IPR009044 GO:0003677|GO:0006355
Mal6g1903 264 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 45 264 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mal6g1903 264 SUPERFAMILY ssDNA-binding transcriptional regulator domain 85 264 IPR009044 GO:0003677|GO:0006355
Mal6g1903 264 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 45 264 - -
Mal6g1903 264 Pfam Whirly transcription factor 92 226 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1903 Mal-Chr6 40322172 40328328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1903 1 264 Whirly Transcription Factor Family AT1G14410 56.296 1.56e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mal6g1903 Whirly 6.6e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1903 - - lang:109355868 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1903 6 40322172 40328328 Mal6g1903 6 40322172 40328328 ECH