Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1868 ATGGCAGGTGGCAAGCTTTTTGGTGGTTCTAATATGTCACTTTTGCTTCAAAATGAAAGACTCCCTTGTTCCTCTGAAGTCCTTGAATCTCTTTGGGTTCACACCCCCTCTTTTCAAGGTTCAAATTCAGTGGTTGATTTCGAGAATTGTGGTGGTGGAAGCAGAATGGTAACAGATAGACCCTTCTTTCAACAACTTGAGAAAGAAGAGAATTGTGGTGATGATGATTATGAAGCATGCTACCATCAACAAGGAAAGAAAAGGAGGCTTTCAAGTGAACAAGTTCAATTCCTTGAAAAAAGTTTTGAGGTAGAAAACAAGCTTGAACCTGAAAGGAAAGTTCAACTTGCAAAAGAGCTTGGTTTACAACCAAGGCAAGTTGCTATATGGTTCCAAAACAGAAGGGCAAGGTTCAAAACTAAACAGCTTGAAAAAGACTATGGCACATTGAAAGCTAGCTTTGATAGTCTCAAAGATGATTATGATAATCTTCTTCAAGAGAATAACAAGTTAAAAGAAGAGGTGAATTCCCTCAAGAACAAATTGATTCCAAGAGATAATGAGAAAGAGAATTCAGAAGACAAATCATCACCAGAAGCTACCAATTCACCTCACAAGAACAAAGATCCAATAGATTTAATCTCAAATACAAATTCTGAAAATGGGTCCAAAGTGTCACTCCCTAATATGGTACTAAAATGTAAGCAAGAAGATGCAAATTCAGCTAAAAGTGATGTGCTTGATTCTGATAGCCCACATTGCAATGATGTGAACAATCTTTCCTCTTTCATGGAGCCTACAGATTCTTCACATGTTTTTGAACCTGATCATTCAGATTTCTCACAAGATGAAGAGGACAATGATAACTTGAGTCATAATCTTTTGACCCTTCCTTGCTTACCAAAAGTTGAAGATGTTTGTTATGATGACCCACATGAAAATTCTTGTAATTTTGGGTTCCCTGTTGAAGATCAAACCTTTTGTTTCTGGCCTTATTGA 999 0.3704 MAGGKLFGGSNMSLLLQNERLPCSSEVLESLWVHTPSFQGSNSVVDFENCGGGSRMVTDRPFFQQLEKEENCGDDDYEACYHQQGKKRRLSSEQVQFLEKSFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASFDSLKDDYDNLLQENNKLKEEVNSLKNKLIPRDNEKENSEDKSSPEATNSPHKNKDPIDLISNTNSENGSKVSLPNMVLKCKQEDANSAKSDVLDSDSPHCNDVNNLSSFMEPTDSSHVFEPDHSDFSQDEEDNDNLSHNLLTLPCLPKVEDVCYDDPHENSCNFGFPVEDQTFCFWPY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1868 332 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Mal6g1868 332 Pfam Homeobox associated leucine zipper 141 182 IPR003106 GO:0006355|GO:0043565
Mal6g1868 332 SMART HOX_1 84 145 IPR001356 GO:0003677
Mal6g1868 332 Coils Coil 154 181 - -
Mal6g1868 332 PRINTS Lambda-repressor HTH signature 112 121 IPR000047 GO:0003677
Mal6g1868 332 PRINTS Lambda-repressor HTH signature 121 137 IPR000047 GO:0003677
Mal6g1868 332 Gene3D - 79 147 - -
Mal6g1868 332 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 332 - -
Mal6g1868 332 MobiDBLite consensus disorder prediction 208 225 - -
Mal6g1868 332 MobiDBLite consensus disorder prediction 176 225 - -
Mal6g1868 332 CDD homeodomain 86 142 IPR001356 GO:0003677
Mal6g1868 332 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Mal6g1868 332 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 332 IPR045224 GO:0003700
Mal6g1868 332 SUPERFAMILY Homeodomain-like 75 143 IPR009057 -
Mal6g1868 332 MobiDBLite consensus disorder prediction 176 206 - -
Mal6g1868 332 Pfam Homeodomain 86 139 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1868 Mal-Chr6 38220782 38222678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1868 36 182 Homeobox Transcription Factor Family AT3G01470 51.572 1.16e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g1868 Homeodomain 4.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1868 - K09338 gmx:100804328 422.55