Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1864 ATGAGTCGCAAGAGAGACAACTCCTTTTTTTCCCGCCACGACTTCAAGCGCCGTCGGCCACTCCCAGAACCTCCGGCGGAGGAAGAAAAACCCACCAAGCGCCCAACGCCGCCGTCTGCGGTGGTCGTCATGGGTCTACCTCTTGACTGCTCCGTCCTTGATCTCAAGTCTCGATTCGAGATCTACGGCTCCATCTCCCGCATCCGTATCGACCGTGACGCCGTCGGCTATATCACCTACCGGACCAAAGACTCCGCAGACGCCGCCATCGCCGCTGGCCATGATCCTTCCTTTGGTGTCACTGTTAATTCCAAAAAGGTTCAAGTACTGTGGGCAACAGATCCTCTAGCAATGTGGAGAGAAGGAGTTGGTAAGAACAAGGATAATGTGTCCATGTCAAAGCTTGTGCGAGCTGAGGTACCTTTGAGGAGGCATGGGAGAGGTAATAGACTTGCATCAACTATAGGCAAAGGCAAAAGTAGTGAAGATGATTCTGGTAGCTCAGTTCTTGAAGTTCCTTTCAAGGGCAGAGAAATTGTTGCTTATGATGATATATTGTAA 561 0.5098 MSRKRDNSFFSRHDFKRRRPLPEPPAEEEKPTKRPTPPSAVVVMGLPLDCSVLDLKSRFEIYGSISRIRIDRDAVGYITYRTKDSADAAIAAGHDPSFGVTVNSKKVQVLWATDPLAMWREGVGKNKDNVSMSKLVRAEVPLRRHGRGNRLASTIGKGKSSEDDSGSSVLEVPFKGREIVAYDDIL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1864 186 MobiDBLite consensus disorder prediction 149 169 - -
Mal6g1864 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 114 IPR000504 GO:0003723
Mal6g1864 186 SMART rrm1_1 40 110 IPR000504 GO:0003723
Mal6g1864 186 Gene3D - 2 116 IPR012677 -
Mal6g1864 186 SUPERFAMILY RNA-binding domain, RBD 24 120 IPR035979 GO:0003676
Mal6g1864 186 MobiDBLite consensus disorder prediction 1 39 - -
Mal6g1864 186 MobiDBLite consensus disorder prediction 1 34 - -
Mal6g1864 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 92 IPR000504 GO:0003723
Mal6g1864 186 CDD RRM_SF 41 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1864 1 186 Homeobox Transcription Factor Family AT1G27050 51.220 2.10e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1864 - - ccaj:109806897 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1864 6 37873793 37875470 Mal6g1864 6 37873793 37875470 ECH