Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1850 ATGGAAGTTGGTGATGGGAATGGAGACCATGTTGCTGATGGGAATGAAGGGCAAGCTTTCAATGAGATTGCTGACAATGATTCATGTAACGATGATTTACAGGTTAATGGTAAAGAACCATACATAGGAATGCAATTCGACTCACAGGAAAATGCTTATTCATTTTACAATAATTATGCTAAATGTGTCGGATTCGGAATATCAACTAAAAATAGTCGTCGTTCAAAAGTTTCTAGACAGTTTATTGATGTGACTTATGCTTGCACAAGATATGGGAAGAAGCGGGAATCCATTGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTAGCTTACGTATGAAAAGAAGTTCCGATGGAAATTGGATTGTTCATAACTTCATTAAAGACCACAATCATGAACTTTTTCCAGCATATGCACATTATTTTCCTTGCGATAGAGGAATCAATAAAGCTCAAAAGCATTGTATTGAAACTATGCACCATGTTGGAGTGAGAACAAGCAAAATTTATGCTACATTGGCCAAACAACATGGAGGATATGAAAACATTGGTTGCTTGGAGAAAGATGTCAGAAATCATTTAGATAAAGGTCGGCGATTGGATTTAGAATCAGGAGACGCAAATGCAATGTTAGAGTGTTTTTTGCTCATGCAAGAGGAAAATCCAAGATTCTTTTATGCAATTGATTTGGATGATGAAAATCGTATAAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGATGACTATCAAGAGTTCGGAGATGTGGTTTCATTTGATACTACATATATCACTAATAAGTACAAGATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGTTGTGCGTTACTCTCAGATGAGACCACACATACTTTCACATGGTTGATGAAAACATGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATAATAACTGATCAAGATAGAGGAATGAAAGCGGCTATCAAAGAGGTATTCCCAAGTGCTCGACATCGCTTTTGTCTTTGGCATATACTTCGAAAGGTGCCCGAGAAGCTTAGTCATGTACTATCAAAACATGAAAACTTCATGACATATCTCAACATGTGCATTTATAAGTCTTGGTCAAAACAGGAATTTGAAGATAAATGGCATGAAATGGTAGAAAAATTTCAACTATTGGGCGATGAGTGGATTCACTCTTTATATGAAGAACGTGAACATTGGGTTCCTGTTTACATGAAAGATACAATTTTTGGTGGCATGTCAACTACTCAGAGATCAGAGAGCATTAATTCTTTTTTTGACAAATATGTATGTAAGAAAACTACATTAAAGGAATTTGTTGAAAAATATAAAGTTGCTTTACAAGATAGAGAAGAAGCGGAAATGCAAGCAGATTTTAATACATGGCACAAGCAACCTGTTCTTAAGACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTCTTCAAGAAATTTCAAGTTGAAGTTTTGGGATTGTCTGGATGTCGTATTGTGAAAGAGCATAACGATAGTCTAACTACAACTTTTACAATCTTCGACTTTCAGCAAAATGAAGAGTTTATTGTAGAGTGTGATGTATTGAAAGAAGAAATATCATGCATATGTCACTTGTTTGAGTATAGTGGGTATCTTTGCAGACATTCATTAATGGCACTCCAAGTTGTTGGTGTATTTGCTGTCCCATCACGTTATATATTGAGAAGATGGACCAAGGATATTAGAAGCAAGCATCACAAAAGGAAAATGAGAGAAGATGTTTGTTCTAATAAGGAGAGATATGATCATTTATATCAAAATGCTATTGAATTGCTTGAGGAAGGATCGTTAAGTTCTGAGAGCTACAATTTTGCATGTCATGCACTTGAAGAGACCTTGAAACAGTGTGCATCTATCAATCAATCTTTGAAAATAAACAAGGAACATGTTGGTCAAAATACTTTACATGAGAAGCCACTACGTAATCCCAAAGATTCAAAAACAAAAGGAGCTCCAAGAAGAATAAAGAGTGGGATCGAGAAAGGTCGTAAGAGAACATCTAAGGTTAAAACAAAAAAGTCTGATATTGTTCAAAGAGAAGAAATAAATACCTCAAATATTATCAATGATGAAGTGATAGTTGCACCAACAAGAATGGCAAATCAACAGGGTTCGGGGAGTTAA 2217 0.3568 MEVGDGNGDHVADGNEGQAFNEIADNDSCNDDLQVNGKEPYIGMQFDSQENAYSFYNNYAKCVGFGISTKNSRRSKVSRQFIDVTYACTRYGKKRESIAQNPRPCLKVECEASLRMKRSSDGNWIVHNFIKDHNHELFPAYAHYFPCDRGINKAQKHCIETMHHVGVRTSKIYATLAKQHGGYENIGCLEKDVRNHLDKGRRLDLESGDANAMLECFLLMQEENPRFFYAIDLDDENRIKNVFWVDAKGRDDYQEFGDVVSFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDETTHTFTWLMKTWLRAMGGKPPNAIITDQDRGMKAAIKEVFPSARHRFCLWHILRKVPEKLSHVLSKHENFMTYLNMCIYKSWSKQEFEDKWHEMVEKFQLLGDEWIHSLYEEREHWVPVYMKDTIFGGMSTTQRSESINSFFDKYVCKKTTLKEFVEKYKVALQDREEAEMQADFNTWHKQPVLKTPSPFEKQMSMIYTHEVFKKFQVEVLGLSGCRIVKEHNDSLTTTFTIFDFQQNEEFIVECDVLKEEISCICHLFEYSGYLCRHSLMALQVVGVFAVPSRYILRRWTKDIRSKHHKRKMREDVCSNKERYDHLYQNAIELLEEGSLSSESYNFACHALEETLKQCASINQSLKINKEHVGQNTLHEKPLRNPKDSKTKGAPRRIKSGIEKGRKRTSKVKTKKSDIVQREEINTSNIINDEVIVAPTRMANQQGSGS* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1850 738 MobiDBLite consensus disorder prediction 661 688 - -
Mal6g1850 738 MobiDBLite consensus disorder prediction 660 706 - -
Mal6g1850 738 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 16 670 IPR031052 GO:0006355
Mal6g1850 738 Pfam SWIM zinc finger 543 573 IPR007527 GO:0008270
Mal6g1850 738 ProSitePatterns Transposases, Mutator family, signature. 325 349 IPR001207 GO:0003677|GO:0004803|GO:0006313
Mal6g1850 738 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
Mal6g1850 738 Pfam MULE transposase domain 259 352 IPR018289 -
Mal6g1850 738 Coils Coil 450 470 - -
Mal6g1850 738 SMART 26again6 550 577 IPR006564 GO:0008270
Mal6g1850 738 Pfam FAR1 DNA-binding domain 54 139 IPR004330 -
Mal6g1850 738 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 16 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1850 Mal-Chr6 37475361 37477756 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g1850 MULE 1.3e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1850 - - dzi:111309578 914.064