Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1848 ATGGACTTTTATCCTCAACAAATGATTTTCCATTTGATCCTATTCATCGGTTATTGTTTTTGTCTTGGTAGAGCCAGTGATTGTGGTGGAAATCAAGTTCTGAATACCATTATTGTTGATCAACAAGGAAGAGGAGCATTCAAAATGGTTCAACCTGCCATTGATTCAATAAAGAATAACAATGATAAGTGGATTAAGATTCATATAAATCCTGGAAAATACGTGGATACTATTCATGTTCCCAATGACAAACCGTGCATCATTTTAGAAGGATCGGATAGAAGCACCACAATAATTAGTCATGGTGATATACAAGCAACAACAACATTCATTTCATATCCGCCTAATGTAATTTTGAGTGGTATTACATTTGAGAACACACATGGAAATAATGGACCGGCTGTAGCTGCTCAAATAAATGGTGATAAATCAGCTATCTTTAATTGTAATTTCTTGGGTTATCAAGACACTTTGTTTGATGGAACTGGGCGACATTACTTTAAGAATTGTTATATTCAAGGTGAAGTTGACTTCATTTTTGGTGGAGCTCAATCTTATTACGAGGATTGTGTGATAAACGCAACACAAGATAGTTCTAAGCCTTCGGGTTTTATCACAGCCCAATATAGGAAATCATCAGATGAACCAAATGGTTTTGTTTTTAGAAGAGGACATGTTACTGGAATTGGTAAAGTGAATCTAGGAAGAGCATGGGGGCCTTACTCAAGAGTTATATTTTGGGAAACATACTTTTCTTCGGTGGTACTTCCATATGGATGGGATGCTTGGGACTACAAAGGACATGAAAACAACTTTATCTATGCGGAAGTTGATTGTACGGGACCAGGGTCCAATACTCAAGGGCGTGTCAAGTGGGAGAAGAAGCCGAATGAAATAAATCTAAATGAATATTCTTTATCATCTTTCATAAATGAAGATGGATGGCTTGCCAACATACCAAATATATTTGTGTAA 975 0.3631 MDFYPQQMIFHLILFIGYCFCLGRASDCGGNQVLNTIIVDQQGRGAFKMVQPAIDSIKNNNDKWIKIHINPGKYVDTIHVPNDKPCIILEGSDRSTTIISHGDIQATTTFISYPPNVILSGITFENTHGNNGPAVAAQINGDKSAIFNCNFLGYQDTLFDGTGRHYFKNCYIQGEVDFIFGGAQSYYEDCVINATQDSSKPSGFITAQYRKSSDEPNGFVFRRGHVTGIGKVNLGRAWGPYSRVIFWETYFSSVVLPYGWDAWDYKGHENNFIYAEVDCTGPGSNTQGRVKWEKKPNEINLNEYSLSSFINEDGWLANIPNIFV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1848 324 Gene3D - 33 322 IPR012334 -
Mal6g1848 324 Pfam Pectinesterase 37 312 IPR000070 GO:0030599|GO:0042545
Mal6g1848 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 322 - -
Mal6g1848 324 PANTHER PECTINESTERASE 1 322 - -
Mal6g1848 324 SUPERFAMILY Pectin lyase-like 35 317 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1848 Mal-Chr6 37424190 37427221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1848 27 269 Carbohydrate Esterase AT2G19150 47.059 5.15e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1848 - - mtr:MTR_5g088290 545.043