Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1844 ATGGGTAATCGTGATTACTACAAAATCCTAAAGGTTAACCATGATGCAACAACCGAAGAGTTGAAGAATTCATATAAGAATTTAGCTATGAAATGGCACCCAGATAGGATTAAACAATACCCTTCAAGGAAACAAGAGTTTGAGGTGAAGTTTAAGAGAATTTCTGAGGCTTATGATGTACTTAGTGATCCTAAGAAGCGTCAGATCTATGATCTGTTTGGTCAATATCCTGTGAATTTGGAAAAGGGTGATGGGAATAATATGGAGGTTGATGAAGGTGTTGGTGTTGTTGAGAGTGATTTGTTATGTAGCCTTGAAGAGCTTTATAAGGGTTGCAGGAAGAAGGTGAATGTTGTAAGGACTGTTCCTGATGAAAATGGAGAGTTGAAGTGTGTAGAAGAAATCTTGAAGATACATATTGAACCTGGTTGGAAGAAGGGCACAAAAATCACTTTTCCTGGGAAAGGAAACCAACTACCAGGATCTGCACCATCTGATCTAATTTTTGTGGTGAATGAGAGACCACATGCTATATTCAAGAGAGATGGAAAAGATTTGATCATGACTGAAAAGATATCACTTCTGGAAGCTCTTGTTGGAAAGACTCTCAACATAACAACCTTGGATGGTAGACATATCACGGTTGAATTGGATGATATTGTGACACCGGGATATGAAAAGGTGGTCTCTGATGAAGGTATGCCAATTGCAAAGGAACCAAGCAAGAGAGGAAACCTTAGAATCAAGTTTGATGTTATGTATCCACCAAGTTTGACCTCACAACAAAAATATGATGTAAGAAGGATTTTGAATGATCATGCTGATTACTAA 831 0.3791 MGNRDYYKILKVNHDATTEELKNSYKNLAMKWHPDRIKQYPSRKQEFEVKFKRISEAYDVLSDPKKRQIYDLFGQYPVNLEKGDGNNMEVDEGVGVVESDLLCSLEELYKGCRKKVNVVRTVPDENGELKCVEEILKIHIEPGWKKGTKITFPGKGNQLPGSAPSDLIFVVNERPHAIFKRDGKDLIMTEKISLLEALVGKTLNITTLDGRHITVELDDIVTPGYEKVVSDEGMPIAKEPSKRGNLRIKFDVMYPPSLTSQQKYDVRRILNDHADY* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1844 276 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Mal6g1844 276 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 272 - -
Mal6g1844 276 CDD DnaJ 5 63 IPR001623 -
Mal6g1844 276 PRINTS DnaJ domain signature 7 25 IPR001623 -
Mal6g1844 276 PRINTS DnaJ domain signature 25 40 IPR001623 -
Mal6g1844 276 PRINTS DnaJ domain signature 66 85 IPR001623 -
Mal6g1844 276 PRINTS DnaJ domain signature 46 66 IPR001623 -
Mal6g1844 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 179 263 IPR008971 GO:0006457|GO:0051082
Mal6g1844 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 99 176 IPR008971 GO:0006457|GO:0051082
Mal6g1844 276 CDD DnaJ_C 97 258 - -
Mal6g1844 276 Gene3D DnaJ domain 1 89 IPR036869 -
Mal6g1844 276 Gene3D - 176 255 - -
Mal6g1844 276 SMART dnaj_3 4 66 IPR001623 -
Mal6g1844 276 Pfam DnaJ domain 5 71 IPR001623 -
Mal6g1844 276 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 272 - -
Mal6g1844 276 Pfam DnaJ C terminal domain 98 255 IPR002939 -
Mal6g1844 276 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Mal6g1844 276 SUPERFAMILY Chaperone J-domain 1 87 IPR036869 -
Mal6g1844 276 Gene3D - 95 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1844 Mal-Chr6 37306825 37309315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1844 4 71 C2H2 Transcription Factor Family AT1G74250 36.232 1.08e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1844 K09510 - gmx:100778440 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1844 6 37306825 37309315 Mal6g1844 6 37306825 37309315 ECH