Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1828 ATGTCTCCCTTAACCATTCTTCTCACCTTCCTCCTCATCCTTCTACTCTTCCCTACTTCAACACACACTTGTCCTACTAATAACCCAAACACAACAAAAACACACCCTTGCCCACCATTCTCATCCACCCCACCTTACCCATTCTCAACTTCACCAGGCTGTGGCCACCCTTATTTCCAACTAACATGCTCAACCCCACACTCTTTCATCACAATCAACAACCTCTCTTTCTCAATCCTCTCTTACAAACCAAACTCCTCCTCAATCCTCCTCTCTCCTAACCCCATTTCACACTCACCACAAAACAACAGCAAATGCCCAACAACATCCTCAATCCCTAACAAACCAATAAACCTCTCCCACACACCCTTCACTCTCTCCGAAGAAACATGCTCACGTCTCTCTTTTCTCCAACCATGCACCCCACCAACTCTCCCAAACTGCAGCCTTTGTCCTTATCAATGCAAACTCATAAAAAACCCAACAGAAATCTTCAAAAGTTGCAGATCCATGCACCACTCAGTTTCAGACAATGAACCTAGCTGTCAAAGTGATGTTCTTGGTTACCTCAATGAAATACTAACCTTAGGTATCGAACTTGAATGGGATGAAGCATTAACACAAGACACATACTTCACAAACTGCAGAGAATGCATCAACAACAACGGTTTTTGTGGCTTCAATTCATCAGACACGAAAAAACACTTCATTTGTTATCATTTCCATTCCAAATCAACTCTTTCACCACTGTGGATCCACAAAACGAAACCTAGCAAAATCATCGTTTTCGCTGTAGTTATTGCTTTCGCTTCGTTGATTCTTTTCCTCTCGGTTGTTATCTCGATCCTTCGATCCAGAAAGTTAAACACGACGGTGGAAGAAGATCCCACCGTTGTGTTTCTTCATAACCACCGCAACGCGAATCTTCTTCCACCGGTTTTCACCTACGATGAATTGAATGTATCTACAAATAATTTCGATCCGAAGAGGAAAATCGGTGACGGTGGATTCGGTTCGGTTTATTTAGGCAACCTCCGTGATGGAAAACTCGCCGCCGTGAAACATCTTCACCGACATAATCACACGGCGGCGTTTTCATCAAAATCATTCTGCAACGAGATTCTGATTCTCTCATCAATCGATCATCCAAATCTCGTTAAACTTCACGGTTACTGTAGCGATCCACGAGGTTTGATTCTCGTTTACGATTACGTTCCTAACGGAACCCTAGCGGAGCATCTTCACGGTTCGAAGAGTAAACGGAAAGGTTACAAGCTGACGTGGCAAACGAGGCTTGAAATTGCGATACAAACGGCGTTAGCGATGGAGTATCTTCATTTTTCAGTTAAGCCACCGATTGTTCATAGAGATATAACGTCGTCAAATATTTTTATTGAGAAAGATATGAGGATTAAAGTTGGTGATTTTGGGTTATCGAGGTTGTTGGTTTTGGAGGAAAGGAATCAAACGACAACATCTGATGGTTTTGTATGGACTGGTCCACAAGGTACTCCGGGTTATTTAGACCCGGATTATCATCGCTCTTTTCGGTTGACTGAAAAGAGTGATGTGTATAGTTTTGGTGTTGTTTTGCTTGAGTTGATTTCCGGTCTTAAAGCGGTGGATTATTGTAGGGATAAACGTGAGATGGCGCTGGCGGATATGGTTGTTTCGAGGATTCATACGGGTCAATTGAAAGAGGTACTTGACCCGGTTCTTGATTTGGGTAATGATGATGAAGCGCTTGATGCGGTTGCGGCGGTGGCGGAGTTGGCTTTCCGATGTGTTGCATCGGACAAAGATGATCGACCTGATTCAAAGGAGGTTGTCGGGGAATTGAAACGAGTTCGATCACGAACAAGTGGTGGCCAACTTGACTTAAATGAATGA 1890 0.4349 MSPLTILLTFLLILLLFPTSTHTCPTNNPNTTKTHPCPPFSSTPPYPFSTSPGCGHPYFQLTCSTPHSFITINNLSFSILSYKPNSSSILLSPNPISHSPQNNSKCPTTSSIPNKPINLSHTPFTLSEETCSRLSFLQPCTPPTLPNCSLCPYQCKLIKNPTEIFKSCRSMHHSVSDNEPSCQSDVLGYLNEILTLGIELEWDEALTQDTYFTNCRECINNNGFCGFNSSDTKKHFICYHFHSKSTLSPLWIHKTKPSKIIVFAVVIAFASLILFLSVVISILRSRKLNTTVEEDPTVVFLHNHRNANLLPPVFTYDELNVSTNNFDPKRKIGDGGFGSVYLGNLRDGKLAAVKHLHRHNHTAAFSSKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYVPNGTLAEHLHGSKSKRKGYKLTWQTRLEIAIQTALAMEYLHFSVKPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLEERNQTTTSDGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDYCRDKREMALADMVVSRIHTGQLKEVLDPVLDLGNDDEALDAVAAVAELAFRCVASDKDDRPDSKEVVGELKRVRSRTSGGQLDLNE* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1828 629 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 622 IPR045274 GO:0007166
Mal6g1828 629 ProSitePatterns Tyrosine protein kinases specific active-site signature. 453 465 IPR008266 GO:0004672|GO:0006468
Mal6g1828 629 ProSiteProfiles Protein kinase domain profile. 326 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1828 629 Gene3D Phosphorylase Kinase; domain 1 302 404 - -
Mal6g1828 629 SUPERFAMILY Protein kinase-like (PK-like) 308 613 IPR011009 -
Mal6g1828 629 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 26 622 - -
Mal6g1828 629 CDD STKc_IRAK 332 615 - -
Mal6g1828 629 MobiDBLite consensus disorder prediction 600 615 - -
Mal6g1828 629 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Mal6g1828 629 MobiDBLite consensus disorder prediction 600 629 - -
Mal6g1828 629 Gene3D Transferase(Phosphotransferase) domain 1 405 625 - -
Mal6g1828 629 Pfam Protein tyrosine and serine/threonine kinase 329 612 IPR001245 GO:0004672|GO:0006468
Mal6g1828 629 Pfam Wall-associated receptor kinase C-terminal 166 239 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1828 Mal-Chr6 36832272 36834161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1828 37 627 Receptor kinase-like Gene Family AT1G69910 60.099 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal6g1828 PK_Tyr_Ser-Thr 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1828 - - cam:101489033 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1828 6 36832272 36834161 Mal6g1828 6 36832272 36834161 ECH