Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1813 ATGGATCCAACGCCAATATTCAACGCTGCTCCCAACTCGCCGTCGATCTGGCACTTGAGAACACCACAGTTCGCCCACGGCTTCCGAGATTTTTCAATGGAAGATCCCCAGAAACCGGTGAACCATGCTCGGAAAAGACGAGACACGGAGGAGGATTCTGTTAAAGATGTTTCCACCACCAATGCCGTGGATGATAATGATGGTGGAGGTGATGGTGATGGAAAAAGGAGTAAGACATCAGGGAACATTAAAGGTGATATAAACAGTTCAGGAAAGCATGCGGAAGAAACTAGTGATGAGCCACATCCTAAGAAAGACTACATCCATGTCCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAAATTAGTGAAAGGATGAAAACTCTTCAGGATTTAGTCCCTGGTTGCAACAAGGTGATTGGGAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCACTTCACCACCAAGTAGAGTTTTTGTCGATGAAGCTTGAAGCAGTAAATTCAAGATCAACACCTGGTATTGAAGTGTTTCCTCCTAAAGATTATAATCAGCAAACATATGATACAACCGCCATGCCATTTGCTTCACAAGCTACAAGAGAATACAGCCGGGGTTCATCACCAGAGTGGCTACATATGCAGGTGGGAGGTGGTTTTGAAAGAACAACATAG 714 0.4412 MDPTPIFNAAPNSPSIWHLRTPQFAHGFRDFSMEDPQKPVNHARKRRDTEEDSVKDVSTTNAVDDNDGGGDGDGKRSKTSGNIKGDINSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRSTPGIEVFPPKDYNQQTYDTTAMPFASQATREYSRGSSPEWLHMQVGGGFERTT* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1813 237 MobiDBLite consensus disorder prediction 28 107 - -
Mal6g1813 237 CDD bHLH_AtBPE_like 106 191 - -
Mal6g1813 237 MobiDBLite consensus disorder prediction 89 107 - -
Mal6g1813 237 PANTHER BNAC05G07950D PROTEIN 36 237 - -
Mal6g1813 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 183 IPR036638 GO:0046983
Mal6g1813 237 SMART finulus 122 172 IPR011598 GO:0046983
Mal6g1813 237 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 36 237 IPR024097 GO:0006355
Mal6g1813 237 MobiDBLite consensus disorder prediction 31 58 - -
Mal6g1813 237 Gene3D - 113 185 IPR036638 GO:0046983
Mal6g1813 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 166 IPR011598 GO:0046983
Mal6g1813 237 Pfam Helix-loop-helix DNA-binding domain 120 166 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1813 Mal-Chr6 36495880 36499443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1813 40 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 66.456 1.17e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g1813 HLH 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1813 - - gmx:100794893 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1813 6 36495880 36499443 Mal6g1813 6 36495880 36499443 ECH