Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1794 ATGTATCTCAATGAAATAAAGGAAGTGTTTAAAGAAGAGATGCATAAGTATAAGGAATTTTTAAGGGTCTTGAAAGATTTCGAGAAACAAAGAATGGATCTAGCGGGCGTGGTGGTAAGAGTGAAGGAATTGTTTCAAGGGCACGATGAATTGTTATTGAAATTTGAAAAGTTTTTGCCAGATGGATTTGAAATCTCACCTCCACGAAAGAAACCAAAAGTGATCACTAAAGAATATGCTTTGAAATATTTGGACAAGGTGAAGACTCGATTTCGACGAAATCCTCAGGTTTACGAATCGTTTCTAGACATACTGCAAATGTATAAGAACAAACATAAGAGTAGTGCGGACGTCTACCAAACGGTTATTTCAATTTTTCAAGGCCACCCGGATCTTGTTGATGAGTTTACTGATTTTCTCCCATAA 426 0.3638 MYLNEIKEVFKEEMHKYKEFLRVLKDFEKQRMDLAGVVVRVKELFQGHDELLLKFEKFLPDGFEISPPRKKPKVITKEYALKYLDKVKTRFRRNPQVYESFLDILQMYKNKHKSSADVYQTVISIFQGHPDLVDEFTDFLP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1794 141 PANTHER SIN3B-RELATED 2 141 IPR039774 GO:0003714
Mal6g1794 141 Gene3D Paired amphipathic helix 80 141 IPR036600 GO:0006355
Mal6g1794 141 Gene3D Paired amphipathic helix 1 60 IPR036600 GO:0006355
Mal6g1794 141 Pfam Paired amphipathic helix repeat 96 140 IPR003822 GO:0006355
Mal6g1794 141 Pfam Paired amphipathic helix repeat 15 59 IPR003822 GO:0006355
Mal6g1794 141 PANTHER SIN3A, ISOFORM G 2 141 - -
Mal6g1794 141 SUPERFAMILY PAH2 domain 75 141 IPR036600 GO:0006355
Mal6g1794 141 SUPERFAMILY PAH2 domain 2 61 IPR036600 GO:0006355
Mal6g1794 141 ProSiteProfiles PAH domain profile. 71 141 IPR003822 GO:0006355
Mal6g1794 141 ProSiteProfiles PAH domain profile. 1 62 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1794 Mal-Chr6 35327686 35328774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1794 2 96 WRKY Transcription Factor Family AT4G12020 35.789 2.43e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g1794 PAH 4.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1794 K11644 - mtr:MTR_7g013410 234.187