Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1789 ATGTATCTCAATGAAATAAAGGAAGTGTTTAAAGAAGAGATGCATAAGTATAAGAAATTTTTAAGGGCCTTGAAAGATTTCGAGAAACAAAGAATGGATCTAGCGGGCGTGGTGGTAAGAGTGAAGGAATTGTTTCAAGGGCACGATGAATTGTTATTGAAATTTGAAAACTTTTTGCCAGATGGATTTGAAATCTCACCTCCACGAAAGAAACCAAAAGTGATCACTAAAGAATATGCTTTGAAATATTTGGACAAGACTCGATTTCGACGCAATCCTCAGGTTTACGAATCGTTTCTAGACATACTGCAAATGTATAAGAACAAGCATAAGAGTAGTGCGGAGGTCTACCAAACGGTTATTTCAATTTTTCAAGGCCACCCGGATCTTGTTGATGAGTTTACTGATTTTCTCCCATAA 420 0.3667 MYLNEIKEVFKEEMHKYKKFLRALKDFEKQRMDLAGVVVRVKELFQGHDELLLKFENFLPDGFEISPPRKKPKVITKEYALKYLDKTRFRRNPQVYESFLDILQMYKNKHKSSAEVYQTVISIFQGHPDLVDEFTDFLP* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1789 139 ProSiteProfiles PAH domain profile. 71 139 IPR003822 GO:0006355
Mal6g1789 139 SUPERFAMILY PAH2 domain 75 139 IPR036600 GO:0006355
Mal6g1789 139 Pfam Paired amphipathic helix repeat 94 138 IPR003822 GO:0006355
Mal6g1789 139 Pfam Paired amphipathic helix repeat 15 59 IPR003822 GO:0006355
Mal6g1789 139 Gene3D Paired amphipathic helix 80 139 IPR036600 GO:0006355
Mal6g1789 139 Gene3D Paired amphipathic helix 1 60 IPR036600 GO:0006355
Mal6g1789 139 PANTHER SIN3B-RELATED 2 139 IPR039774 GO:0003714
Mal6g1789 139 SUPERFAMILY PAH2 domain 2 61 IPR036600 GO:0006355
Mal6g1789 139 ProSiteProfiles PAH domain profile. 1 62 IPR003822 GO:0006355
Mal6g1789 139 PANTHER SIN3A, ISOFORM G 2 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1789 Mal-Chr6 35011788 35013037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1789 2 66 WRKY Transcription Factor Family AT4G12020 43.077 2.62e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g1789 PAH 5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1789 K11644 - mtr:MTR_7g013410 224.172