Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1764 ATGGCGGAACCTCGCCCATCCAAGCGCCCAAAAATTACCAGGGGGGAGGATGATTATATGCCTGGTAACATTCTCGAGATCGAACTGAATAATTTCATGACATTTGATTACCTAAAATGTAAACCTGGGCCACGGTTGAATCTTGTAATTGGGCCCAATGGTTCTGGAAAGAGTTCTCTTTTGCTTGGGCGAGCCAAGAGTATCGCGGCATTTGTGAAGCGCGGAGAAGAGTCGGGGCACATTAAGATTACCTTAAGAGGGGAGCATAATGAAGATCACATTACAATTATGCGTAAAATAAATACCAGCAACAAGTCTGAATGGTTTTTAAATGGAAATGTTGTGTCCAAAAAGGATGTGGCTGAAACCATTCAGAGGTTTAACATCCAAGTAAATAATTTGACTCAATTTTTACCGCAAGACCGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTGCAACTTCTGGAAGAGACCGAAAAGGCTGTTGGTGACCCACAACTTCCAGAGCAACATCGTGTACTAATTGAAAAAAGTCGTGCATTGAAGCATGTTGAACTATCTCTCAAGAGAAACGAAGGAACTTTAAATCAGTTGAAGGAACATAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGTCAAAGAGAAGAACTTCTTGCCAAGGCCAAATCAATGGAAATGAAATTGCCATGGCTGAAGTACGATATGAAGCAGGCAGAATATCGTGAAGCTATTGAGCGTGAGAAGACTGCAGCAAAGGAGTTTAAGGAGGCTGCAAAATTATTAAATGAGCTTAAAGAACCTATCAAGAAACAAAAAGATGAGAAAGCTGCATTAGATGCAAAATGTAAAAAGGTTAGCAACCAAATAAATGTGAATGCCAAGAAGAGAATGGGACTTTTGGATAAAGAGAAACAATTGGAAGTGGAATTACAAGGAAATTACAACGAGATGGACGAGTTGAGGAGGCAGGAAGAAACTAGGCAAGAAAAATTAAGAAAAGCTAGGGATGAACTTGCTGCTGCTGAACTTGAACTTGAGAATCTAAACCCTTATGTACCTCCCACTGATGAGATTCAAAGACTGAGAAATGAAATTGTGGAGTTGGAAACTTCTGCTAATCAAGAGGGAGAGAATAAATCACTAGCAGAAAAAGAAATAAATCGTAAAAAGTTCTCGTTGAAGAATTGTAAAGACAGGTTGAAGGAAATGAGTAATAAAAGTTACAAGTGTTTACTTGGATTGCAAAATTCTGGGGTTGAAAAAATATTCGAAGCTGATAAATGGGTCCAAGCGCATCGCCATAAATTCAACAAGGAGGTTTACGGCCCAGTTTTAGCTGAGGTGAATCTCTCAGTCTCAGCTCAGTCTCATGCTCAGTCTCATGCTGGATATCTAGAGGGTCAAATTGCTCGGTACACTTGGAAGTCTTTTATAACACAGGATCCTCGTGATCGGGACTTTTTGGCGAACAACCTACGGCAGTATGATGTGCCGGTTTTAAATTATACTGGTCGTGATAGCGAACAAAGAGAGCCTTCTGAAATTTCTTCTAAAATGCGTGCTCTTGGTATCTATTCCCGTTTGGACCAAATTTTTGATGCTCCTGATGCGGTGAAGGAGCTGTTGATTAGCCAATCTAAGCTTGATCATTCATTTATTGGATCGAAAGAAACTGATCTGAAAGCTGATGAGGTCAAAAAACTGGGGGTTTTTAGTTTATGGACACCAGAAAATCACTATCACTGGTCTACGTCTAGATATGGAAATCATGTCTCAGCAATTGTTGAACAAGTGCAACGCCCGAAACTTCTAGTGAATAATTTAAATGTGAGGGACATTGAGAATCTGAACTGCAAGGAAAGGGAGCTTCAAGAATCCATTGCTTCCTTGGAGGAAAGTGTCAAAAGGTTTCAAGACGAGGAGAAAAGCTTAAGGAATCAGGCTGCTAATCTTCGTAAACAGAAGGAGGACATTAGTACTACAGCACTGAATGAGCAAAATAAACGACAAGAAATAATTAGGCATATTGAACAAAAGAAAGGGATACTGAAATCGATGGAAGAGCAAGATGATTTAGAAACTGGGTTAGCGAAGCTTGTTGGTCAGGCAACAAAATGCAACATTCAGCGATTCCATAATGCAATTAAAATTAAGGATCTTCTAGTGGAAGCTGTGGGTTACAGACGAAGTTATGTTGAACAACGAATGGCTTTGATTGAATTTGATGCAAAGATTGGAGAAATGGAGGCTAATCTGAAGCAACATGAAAATTATGCTCGACAAGCATCAGAGAACTTTAATAAATCTAAGAAAGAGGCTGAAGAATGTAAACAGAAGCTTACAGATTTGTTAAACCATGCTAAATCAATTGCCCCACTTACACCTAACCTAGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAGTTGGAAGCAGCTATTCAAGATACACTATCTCAAGCTAATTTAATCCTTTGTGTCAATAATAACATATTGCGAGAATATGAGGATCGTCAAAGACAGATAGAAGTTCTTGCAAAAAAACTTGACGCAGACAAGAAGGAAGCTACAAAGTGTCTAGCTGAATTGGAAACCATTAAGGTAAAATGGCTCCCAACTCTCAGAAACCTTGTGGCCCAGATAAATGAAACTTTTTGTCGAAATTTTCAACAGATGGCTGTTGCCGGAGATGTTTCACTAGATGAGCATGATATGGACTTTGATCAATTTGGAATACTTATAAAAGTCAAATTCAGAGAAAATGGACAGCTTAAAGTTCTCAGTGCCCATCATCAATCTGGAGGGGAGCGCTCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTTCAGCAGCTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTACTTACACCAAAGCTGTTACCAGATCTGCAATATAGCGAGGCATGCAGTATATTGAATGTAATGAATGGCCCTTGGATTGAGCAACCCTCAAAGGCGTGGGCTACTGGTGAGCGATGGAGTATTATCAGTGGACATGTTGGAGAGATTCCATGTTGA 3138 0.3977 MAEPRPSKRPKITRGEDDYMPGNILEIELNNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLLLGRAKSIAAFVKRGEESGHIKITLRGEHNEDHITIMRKINTSNKSEWFLNGNVVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRVLIEKSRALKHVELSLKRNEGTLNQLKEHNAELEKDVERVRQREELLAKAKSMEMKLPWLKYDMKQAEYREAIEREKTAAKEFKEAAKLLNELKEPIKKQKDEKAALDAKCKKVSNQINVNAKKRMGLLDKEKQLEVELQGNYNEMDELRRQEETRQEKLRKARDELAAAELELENLNPYVPPTDEIQRLRNEIVELETSANQEGENKSLAEKEINRKKFSLKNCKDRLKEMSNKSYKCLLGLQNSGVEKIFEADKWVQAHRHKFNKEVYGPVLAEVNLSVSAQSHAQSHAGYLEGQIARYTWKSFITQDPRDRDFLANNLRQYDVPVLNYTGRDSEQREPSEISSKMRALGIYSRLDQIFDAPDAVKELLISQSKLDHSFIGSKETDLKADEVKKLGVFSLWTPENHYHWSTSRYGNHVSAIVEQVQRPKLLVNNLNVRDIENLNCKERELQESIASLEESVKRFQDEEKSLRNQAANLRKQKEDISTTALNEQNKRQEIIRHIEQKKGILKSMEEQDDLETGLAKLVGQATKCNIQRFHNAIKIKDLLVEAVGYRRSYVEQRMALIEFDAKIGEMEANLKQHENYARQASENFNKSKKEAEECKQKLTDLLNHAKSIAPLTPNLEKEFLEMPTTIEELEAAIQDTLSQANLILCVNNNILREYEDRQRQIEVLAKKLDADKKEATKCLAELETIKVKWLPTLRNLVAQINETFCRNFQQMAVAGDVSLDEHDMDFDQFGILIKVKFRENGQLKVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKAWATGERWSIISGHVGEIPC* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1764 1045 CDD ABC_SMC5_euk 918 1020 - -
Mal6g1764 1045 Coils Coil 188 222 - -
Mal6g1764 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 728 996 IPR027417 -
Mal6g1764 1045 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1039 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Mal6g1764 1045 Coils Coil 359 379 - -
Mal6g1764 1045 Coils Coil 614 662 - -
Mal6g1764 1045 Coils Coil 304 345 - -
Mal6g1764 1045 Coils Coil 746 780 - -
Mal6g1764 1045 CDD ABC_SMC5_euk 22 166 - -
Mal6g1764 1045 Coils Coil 238 265 - -
Mal6g1764 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 291 IPR027417 -
Mal6g1764 1045 Coils Coil 830 857 - -
Mal6g1764 1045 Pfam RecF/RecN/SMC N terminal domain 24 986 IPR003395 -
Mal6g1764 1045 Gene3D - 839 1015 IPR027417 -
Mal6g1764 1045 Coils Coil 269 289 - -
Mal6g1764 1045 Gene3D - 23 229 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1764 Mal-Chr6 33987924 34002931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1764 5 1034 Structural Maintenance of Chromosomes family AT5G15920 58.677 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1764 K22803 - gmx:100778678 1525.76