Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1745 ATGGAAAAGGAAATGTGTGATATTTCTGTTGAGAAGAGGCTTAGGCTATTTGGTTTTGAGCTAAATCCAACAAAGAATAATAATGGACCAGCCAAAGAGTCTAATGAAGGAGATGAAAGTGTGAATTCCTCTAACTCAATTTCATCAGGAGGAGAGAAAATTGTGCAAGAAAAAGTTTCATCTAGAGACCAAGATGAGAAAAAATTTGAGTGTCAATATTGTTTCAAAGAATTTGCAAACTCACAAGCATTAGGAGGCCATCAAAATGCACACAAGAAAGAAAGAATGAAGAAAAAAAGATTGCAACTTCAAGCTAGGAAAGCTAGCATAAACTATTACTTACAACCTTTTCAAAAAAATCATCATGGTTTTTCTTACCATGGTTCTGATACTCATTGGTTTTATGACCCTTCTTCTTATAATTCTGAATTCTCTTTGTGTGAAGAATCTCAAATTAGTTTCAAGTCAAAAAATGTTCATGATACCAACTCTAGTTGGTATTCTCTTCCTTCTCATGTTTCTCCTTCCCAACAAGACACTTGCATGTTTACTTTCTCCAATGATGATAGGCCTTTCATTTTGAACCCTTCTGAAATAAACCAAAGTCATAGTAAATGTTTAGATCTTCAACTAGGCCTCAATTTGCAGTCAAATACAAGAAGCTCTTTGAAAAGGACATAG 681 0.3407 MEKEMCDISVEKRLRLFGFELNPTKNNNGPAKESNEGDESVNSSNSISSGGEKIVQEKVSSRDQDEKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQKNHHGFSYHGSDTHWFYDPSSYNSEFSLCEESQISFKSKNVHDTNSSWYSLPSHVSPSQQDTCMFTFSNDDRPFILNPSEINQSHSKCLDLQLGLNLQSNTRSSLKRT* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1745 226 MobiDBLite consensus disorder prediction 21 55 - -
Mal6g1745 226 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Mal6g1745 226 PANTHER ZINC FINGER PROTEIN 5 7 216 IPR044299 GO:0010090
Mal6g1745 226 MobiDBLite consensus disorder prediction 19 61 - -
Mal6g1745 226 PANTHER ZINC FINGER PROTEIN 5 7 216 - -
Mal6g1745 226 SUPERFAMILY beta-beta-alpha zinc fingers 65 96 IPR036236 -
Mal6g1745 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Mal6g1745 226 Gene3D Classic Zinc Finger 42 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1745 Mal-Chr6 33379311 33379991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1745 66 177 C2H2 Transcription Factor Family AT1G68360 43.478 2.00e-17 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal6g1745 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1745 - - gmx:100799857 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1745 6 33379311 33379991 Mal6g1745 6 33379311 33379991 ECH