Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1744 ATGCCTGGACGACGGTCGAAGTCGGAGAAGAAAGATGCCGACGACGGCTGTGAGAAGCAGCTCCGGCGAGACCCGTATGAAGTCCTTGGCGTTTCAAGGAACTCTACCGATCAAGAAATTAAATCTGCTTATCGGAAATTGGCTCTTAAGTTTCATCCTGATAAGAATGCTAATGATCCCAAAGCAGCTGATATGTTCAAAGAGGCTACCTTTTCTTATAATATCTTGTCGGATCCTGATAAACGGCGTCAGTATGACTCATCTGGCTTTGAGGCCGTTGAATCAGATAGCCAAGAGTTAGAGTTAGATCTTTCAAGTTTGGGTGCTGTCAACACAATGTTTGCTGCACTTTTTAGCAAACTTGGTGTACCAATTAAGACAACTGTATCTGCGACTGTTTTGGAAGAGGCACTCAATGGTTCAGTTACAATTCGCCCAGTTCCATTGGGACAGTTTGTATCTAAAAGGGTTGAGAAGCAATGTGCACATTTCTATTCAGTTACAATAACAGAAGAGGAAGCAAGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGACAAAAGCAAATTCAAGTTATTATATTTCGACCAGGAAGAAAATGGTGGCTTAAGTCTTGCGCTCCAGGAAGACAGTGTGAAAAATGGGAAGGTTACTTCTGCTGGAATGTATTTTCTTGGTTTTCCTGTTTATCGGCTGGATCAAACAATGAACTCCATAGCTGCTTCTAAGGATCCAGATACATCGTTTTTCAAAAAGCTTGATGGGTTCCAGCCCTGTGAATTAACTGAGTTGAAGGCTGGTACCCATATATTTGCAGTTTATGGTGACAACTTTTTCAAAAGTGCAAACTATACAATAGAATTCCTGTGTGCTGCACCTTTTAACGAAGAAAAAGAAAATTTAAGACATGTAGAAGCTCAAATTTTGTCTAAAAGAGCCGAAATATCAAAGTTTGAATCAGAATATCGAGAGGTTCTGGCACAATTCACAGAGATGACAAGCAGATATGCACATGAAATGCAAACAATTGACGAGCTATTGAAACAAAGAAATGAAATACATGCCTCGTACACGGTTGTTCCTTTAAAGCGGAGTAATAGCAGCAAGAGCAGAAGTAAAACATCTTCGAAGGAATCAAAAGAAGATGGCGAAGCAAGAGAAAAGAGGAATACAAGAGAACGACCGAGGAAGAAGAAATGGTATAACCTTCACTTACGAGTTGATAAGAGAAAGGCTTGCTAA 1242 0.4042 MPGRRSKSEKKDADDGCEKQLRRDPYEVLGVSRNSTDQEIKSAYRKLALKFHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDSSGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGSVTIRPVPLGQFVSKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSVKNGKVTSAGMYFLGFPVYRLDQTMNSIAASKDPDTSFFKKLDGFQPCELTELKAGTHIFAVYGDNFFKSANYTIEFLCAAPFNEEKENLRHVEAQILSKRAEISKFESEYREVLAQFTEMTSRYAHEMQTIDELLKQRNEIHASYTVVPLKRSNSSKSRSKTSSKESKEDGEAREKRNTRERPRKKKWYNLHLRVDKRKAC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1744 413 PRINTS DnaJ domain signature 44 59 IPR001623 -
Mal6g1744 413 PRINTS DnaJ domain signature 81 100 IPR001623 -
Mal6g1744 413 PRINTS DnaJ domain signature 26 44 IPR001623 -
Mal6g1744 413 PRINTS DnaJ domain signature 61 81 IPR001623 -
Mal6g1744 413 SUPERFAMILY Chaperone J-domain 23 93 IPR036869 -
Mal6g1744 413 Pfam DnaJ domain 24 86 IPR001623 -
Mal6g1744 413 MobiDBLite consensus disorder prediction 360 401 - -
Mal6g1744 413 CDD DnaJ 24 78 IPR001623 -
Mal6g1744 413 SMART dnaj_3 23 81 IPR001623 -
Mal6g1744 413 ProSiteProfiles dnaJ domain profile. 24 89 IPR001623 -
Mal6g1744 413 Coils Coil 301 321 - -
Mal6g1744 413 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g1744 413 ProSitePatterns Nt-dnaJ domain signature. 66 85 IPR018253 -
Mal6g1744 413 MobiDBLite consensus disorder prediction 371 391 - -
Mal6g1744 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 412 - -
Mal6g1744 413 Gene3D DnaJ domain 8 107 IPR036869 -
Mal6g1744 413 MobiDBLite consensus disorder prediction 1 34 - -
Mal6g1744 413 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1744 Mal-Chr6 33346533 33350675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1744 22 87 C2H2 Transcription Factor Family AT1G74250 45.070 3.14e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1744 - - gmx:100800929 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1744 6 33346533 33350675 Mal6g1744 6 33346533 33350675 ECH